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Detailed information on CNT30303464


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 3e-101

BLAST vs NONCODE:
NONTPRT002153, E-value = 9e-71

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30225777Triticum aestivumHordeum vulgare64.0573.9292.14547forward
CNT30397375Triticum aestivumTriticum turgidum92.5145.4100790forward
CNT30667831Triticum aestivumTriticum dicoccoides76.9385.77100657forward
CNT30722465Triticum aestivumTriticum spelta88.8867.2398.29759forward

Expression of CNT30303464

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPVRVLTKIC

>peptide 2 (37 aa)
VNMAKEADTQYLLRSKTKMGLIKTRRGNQFNRKVKCA*

>peptide 3 (61 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICIPPRRRRTRWRVDSFWML*

Sequence

>CNT30303464
TGTAAACATGGCAAAAGAAGCAGATACTCAGTACCTCCTCAGAAGCAAAACAAAGATGGGGCTGATAAAAACTAGAAGAGGCAACCAATTCAACCGGAAG
GTAAAATGTGCATAGGCAGATTAGTTCAAAGTTCACTTATTCATACTTGACCGTACTGCTATAGCAGCAACTGTTTAAACGAAACCAACACATCTCACAA
CTGTTTAAACGAAACCAACACATCTCACAACTGTTTAAACGAAACCAACACATCTCACAACTGTTTAAACGAAACCAACACATCTCACAGGGACTCGATG
GTCCATGAAACCAGACACGGTAGGACTTGACACAAACGAGACTTAACACTTCACACGAGCGACAGGGGCACCCACCAGAGTACTCAGGGCATTTACTGAC
CACCGCGGAGGCGGAGCACCAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATGAG
ACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAGAGTGATGGTCTTGCCG
GTAAGGGTCTTCACAAAGATCTGCATACCACCTCGGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGT
CCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTATCAGACGA
CTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT