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Detailed information on CNT30667831


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 1e-101

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-75

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30191038Triticum dicoccoidesSecale cereale64.6255.6895.56495forward
CNT30303464Triticum dicoccoidesTriticum aestivum85.7776.93100657forward
CNT30225777Triticum dicoccoidesHordeum vulgare71.4173.9292.14547forward
CNT30397375Triticum dicoccoidesTriticum turgidum85.937.82100658forward
CNT30460849Triticum dicoccoidesSaccharum spontaneum60.0578.3690.22460forward
CNT30143305Triticum dicoccoidesLolium perenne60.4469.5292.44463forward
CNT30107357Triticum dicoccoidesOryza longistaminata60.3161.8590.91462forward
CNT30115854Triticum dicoccoidesOryza nivara60.4461.4192.44463forward
CNT30550711Triticum dicoccoidesOryza brachyantha60.316691.34462forward

Expression of CNT30667831

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICIPPRRRRTRWRVDSFWML*

>peptide 2 (43 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPVRVLTKICI

Sequence

>CNT30667831
GGCTGATAAAAACTAGAAGAGGCAACCAATTCAACCGGAAGGTAAAATGTGCATAGGCAGATTAGTTCAAAGTTCACTTATTCATACTTGACCGTACTGC
TATAGCAGCAACTGTTTAAACGAAACCAACACATCTCACAACTGTTTAAACGAAACCAACACATCTCACAACTGTTTAAACGAAACCAACACATCTCACA
GGGACTCGATGGTCCATGAAACCAGACACGGTAGGACTTGACACAAACGAGACTTAACACTTCACACGAGCGACAGGGGCACCCACCAGAGTACTCAGGG
CATTTACTGACCACCGCGGAGGCGGAGCACCAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGACCATCCTCCAGCTGCTTGCCG
GCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAGAGTGA
TGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCATACCACCTCGGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAG
GGTCCTGCCGTCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATG
GTATCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATC