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Detailed information on CNT30298263


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 8e-103

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-78

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30393934Triticum aestivumTriticum turgidum59.7499.1297.56451forward
CNT30141371Triticum aestivumLolium perenne61.9956.1294.23468forward
CNT30689792Triticum aestivumTriticum urartu96.0359.4798.21725forward
CNT30721839Triticum aestivumTriticum spelta89.9399.2799.12679forward

Expression of CNT30298263

Peptides detected in this lncRNA

>peptide 1 (81 aa)
RKQIKCNCEGLGTAEVQTAKKQAQVQGSFIHSSSSKSAAAQHKVQTQPDITLDHNTVATKNKTRRGHADNHNGVHKKTTDS*

>peptide 2 (62 aa)
MARHLLATTEAEHQVKGGLLLDVVVRQSAAILELLTSKDEALLVRWDTLLVLDLRLHIVDGV*

>peptide 3 (61 aa)
MRRCWSGGIPSLSWIFAFTLSMVSEDSTSSVMVLPVRVFTKICIPPLRRSTRWRVDSFWML*

>peptide 4 (41 aa)
KADQMQLRRFRNCRSTNSKKTGTSSGLIYSFKFIQICCSTA*

>peptide 5 (47 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPWWVFTKICMPPRR

Sequence

>CNT30298263
CGAAAGCAGATCAAATGCAATTGCGAAGGTTTAGGAACTGCAGAAGTACAAACAGCAAAAAAACAGGCACAAGTTCAGGGCTCATTTATTCATTCAAGTT
CATCCAAATCTGCTGCAGCACAGCATAAAGTTCAGACGCAGCCAGATATAACGCTAGACCACAACACGGTAGCAACAAAGAACAAGACCAGACGAGGACA
CGCTGACAATCACAACGGAGTACACAAAAAGACAACCGACTCGTGAGCCCAGAGACATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGGC
GGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTC
CGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTC
ACAAAGATCTGCATACCACCCCTGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCGTCCTCAAGCTGCT
TGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGGACTCGACCTCAAG
GGTGATGGTCTTGCCGTGGTGGGTCTTCACAAAGATCTGCATGCCACCACGCAGG