« Back to Lolium perenne search


Detailed information on CNT30141371


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-101

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-82

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30298263Lolium perenneTriticum aestivum56.1261.9994.23468forward
CNT30721839Lolium perenneTriticum spelta56.3568.7194.68470forward

Expression of CNT30141371

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MVRHLLTTTEAEHQVKGGLLLDVVVRQGAAILQLLTSKYQTLLVRGDTLLVLDLRLHVIDGV*

>peptide 2 (40 aa)
MVSDDSTSRVMVLPVRVLTKICIPPRRRSTRWRVDSFWML*

>peptide 3 (54 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYEVDQSYSN

>peptide 4 (31 aa)
AENKYFSIIISQINIGVQKEPPKGDNTGNRI*

Sequence

>CNT30141371
GAGCTGAAAACAAATACTTCTCAATAATAATATCACAAATCAATATAGGAGTACAAAAAGAACCACCGAAAGGAGATAATACTGGAAATAGAATTTAGAC
ACATAGCAGCATAACAGATATGCATACGCACTAAAATTTCGTAACAAGTTCAGGACTCACTTATTCATTCATTCAAAGTTCAAAGATGCTGCATCACAGC
ATAAGTTTGTAGACACAAGGTGACATAACACGAGACCACAATACAACAGAATCACAGGACCAGACCACCCGAGACACACACCGAAGGAACCAGACTTGTG
AACCCCAGGAGAGAGAAACAGTGCCATGGTTAGGCACTTACTGACCACCACGGAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC
CGCCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAATATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTTA
TCGATGGTGTCTGACGACTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATACCACCACGGAGGCGGAGCACCAGGTGGA
GGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTC
CTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATC
TGTAAATACGAAGTAGACCAGAGTTACAGCAATG