Detailed information on CNT30689792


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-99

BLAST vs NONCODE:
NONGMAT000502, E-value = 2e-45

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30298263Triticum urartuTriticum aestivum59.4796.0398.21725forward
CNT30665165Triticum urartuTriticum dicoccoides63.997.592.81779forward

Expression of CNT30689792

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGIPSLSWIFAFTLSMVSEDSTSSVMVLPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 2 (62 aa)
MARHLLATTEAEHQVKGGLLLDVVVRQSAAILKLLTSKDEALLVWWDTLLVLDLRLHIVDGV*

>peptide 3 (68 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICICKHKVYQNHNKALVIMKLQNIKHI*

>peptide 4 (75 aa)
NCEGLGTAEVQTAKKQAHVQGSFIHSSSSKSAAAQHKVQTQPDITLDHSTVATKNKTRRGHADNHNGVHRKTTDS*

>peptide 5 (28 aa)
MQLRYIRSQIKHRCNIKRLMSATKSERLS

>peptide 6 (31 aa)
MIFRQELMHKYRYLQVLTQQDTISVKSTVLL*

>peptide 7 (36 aa)
QLRRFRNCRSTNSKKTGTRSGLIYSFKFIQICCSTA*

>peptide 8 (39 aa)
MFKFDHKLKRSVNIYDFQTRTDAQVQIPSSFDTTRYNIS*

Sequence

>CNT30689792
CAATTGCGAAGGTTTAGGAACTGCAGAAGTACAAACAGCAAAAAAACAGGCACACGTTCAGGGCTCATTTATTCATTCAAGTTCATCCAAATCTGCTGCA
GCACAGCATAAAGTTCAGACACAGCCAGATATAACGCTAGACCACAGCACGGTAGCAACAAAGAACAAGACCAGACGAGGACACGCTGACAATCACAACG
GAGTACACAGAAAGACAACCGACTCGTGAGCCCAGAGACATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGGCGGAGCACCAAGTGAAGG
GTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATACCCTCCT
TGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCC
ACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGG
CGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGG
TGAGGGTCTTCACAAAGATCTGCATCTGCAAACATAAAGTGTACCAAAACCATAATAAGGCACTCGTAATCATGAAACTGCAGAACATAAAGCATATATG
AACCAGAAGGCCATGATCCAAGAGAGACGAAATTGTAACTATGTCTTGAACTATTAGATAGCAGATTGATGTTCAAGTTTGACCACAAGCTAAAAAGATC
AGTTAATATATATGATTTTCAGACAAGAACTGATGCACAAGTACAGATACCTTCAAGTTTTGACACAACAAGATACAATATCAGTTAAATCAACAGTACT
ACTGTAAGCAAACACAATTGACTCTTAAGAGCAGAACCGGTGCACAAGAACGGATCCTCCAAACAACTACTAGGCCCAACAACTAACATAGGAACCAGTT
TTGCTAAAGCACATCTAGGTGTGCCCAAGTATGCAACTCAGGTATATCCGTTCACAGATCAAGCATAGGTGCAACATAAAAAGGCTCATGAGCGCCACAA
AGTCTGAGCGACTCAGCAG