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Detailed information on CNT30297131


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522288Triticum aestivumSetaria italica20.459.6589.81108forward
CNT30142872Triticum aestivumLolium perenne22.5416.0489.08119forward
CNT30352513Triticum aestivumEragrostis tef21.599.6685.96114forward
CNT30579664Triticum aestivumEchinochloa crusgalli20.4510.3887.04108forward

Expression of CNT30297131

Peptides detected in this lncRNA

>peptide 1 (29 aa)
WSVHKVHTYTHHSLACSEQTEARKESYKH*

Sequence

>CNT30297131
TGGAGCGTACACAAAGTACACACATACACGCATCACTCGCTAGCATGCAGCGAGCAGACTGAGGCAAGAAAAGAAAGTTACAAGCACTAGTAGATAAGTA
GTACGAAGCTCAAGACAAACTACATGCAGCCTCAGACAGCAACGTACGCTATGCAGGATTAGATAACCAAAAGAGCAGCAAACATGGCGGCGTCGCAGAA
CTTCCTGTCTTCAATTCTCTGGCCGTCGGCTCTTATTTAGCGGTGGTTGCTCCCGGGGTGGAAAACGCTCCGCCACACGCTGCCGCCACGCGGCGGCGTC
GACGACGACGGCGTCACCGGCGTGGTCGGGGTCGTCGGCATCGACGGCGACTGCTTAATCGCCTCCCCTGCAGCTGCACCTCCACCAACATCCATGTAAA
CCGCCATCAGTTCACACAATAAACCCAATAGATCCTCTGGTTAAGCATCAAATCTCCTTCTGAAAACCACTGGTGCTAGTTCTTACGTTCTTCTCAACAT
TTTCAGGCCATGTCGGTACCTCTGTGCT