Detailed information on CNT30349044


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30180525Eragrostis tefSecale cereale28.8630.7189.5386forward
CNT30290797Eragrostis tefTriticum aestivum28.8629.9789.5386forward
CNT30242261Eragrostis tefAvena sativa26.5127.8288.6179forward
CNT30659934Eragrostis tefTriticum dicoccoides28.8632.9590.786forward

Expression of CNT30349044

Peptides detected in this lncRNA

>peptide 1 (67 aa)
CFSVGGGGRGHLDADGGGSGEERERGAPGDLALVLLLRLADEQGPRHGGARGGGSRRWTPWLFLSLC*

Sequence

>CNT30349044
CTGCTTCTCCGTAGGCGGCGGCGGCCGGGGACACCTTGACGCCGACGGCGGCGGCTCCGGCGAGGAGCGCGAGCGCGGCGCGCCGGGAGACCTCGCCCTC
GTCCTGCTTTTGCGCCTTGCAGACGAACAGGGCCCTCGGCACGGCGGCGCGCGGGGTGGAGGAAGCAGGAGGTGGACGCCATGGCTCTTTCTCTCTCTCT
GCTGATGCGCCTTCTCGCTCGCCGGCTGCCGCTTGAAGAGTGTGGATGACAGACACTGCTCGCGGGCGTGTTAGCTCGCTCTGTGTTAACGAGGGGAG