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Detailed information on CNT30289038


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-101

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-87

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30180697Triticum aestivumSecale cereale96.3939.589.91694forward
CNT30386702Triticum aestivumTriticum turgidum98.8997.9499.3712forward
CNT30659411Triticum aestivumTriticum dicoccoides10094.9999.03720forward
CNT30127456Triticum aestivumCorymbia citriodora63.1957.390.33455forward
CNT30581037Triticum aestivumEchinochloa crusgalli64.1795.6590.91462forward

Expression of CNT30289038

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVMVLPVRVFTKIC

>peptide 2 (44 aa)
MPSLSWILTLTLSMVSELSTSRVMVFPVRVFTKICMPPRRRRTR*

Sequence

>CNT30289038
TTCAAGCGCAAGCAATGAACAGATATGAGTAAGATCATTGCCAAGCAAGCAACTCAAGCACAAGATTTACCCGAAAGTTCACTTATTCATTAGTACTTGA
AATGAAACTGCTGTACTAGCAATTTCGCAAACCAACACGTAACAGTGATTCGGTAGTTCATTAAACCCAACATAGGACTGACGCGAACAAAAAACTGTTC
AAATGAGCGGACACAACGGACGACCAAGGATAAACCAGCAGGTCCAACGCCAGGGCAATTACTGACCACCACGGAGGCGGAGCACAAGGTGGAGGGTGGA
CTCCTTCTGAATGTTGTAGTCCGCGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCC
TGGATCTTGACCTTGACATTGTCGATGGTGTCAGAGCTCTCAACCTCCAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATTTGCATGCCACCAC
GGAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTG
CTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTAATGGTCTTGCCTGTGAGG
GTCTTCACGAAGATCTGCAT