Detailed information on CNT30180697


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 5e-97

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-74

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30289038Secale cerealeTriticum aestivum39.596.3989.91694forward
CNT30225690Secale cerealeHordeum vulgare24.9365.1894.29438forward
CNT30387004Secale cerealeTriticum turgidum38.9393.9692.54684forward
CNT30659411Secale cerealeTriticum dicoccoides41.3895.9190.51727forward
CNT30141602Secale cerealeLolium perenne26.7568.0293.4470forward
CNT30349330Secale cerealeEragrostis tef26.5230.0693.13466forward

Expression of CNT30180697

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MREQIGQQEPDRSRNRRDSTILHLQPSNQRRSRRHRERGSKRRTLRRWGMRIRRACCRPETRLAGSVP

>peptide 2 (72 aa)
MRRCWSGGMPSLSWILALTLSIVSELSTSRVMVLPVRVFTKICICREESQNRMVRFKKQTKQTNVTNTKNIR*

>peptide 3 (43 aa)
MLVTTKKLTAVLGGQQNMDEQRTTMKSSQEISSTAVQCPLDCL*

>peptide 4 (53 aa)
MPSLSWILALTLSMVSDDSTSSVMVLPVRVLTKICMPPRRRRTRWRVDSFWML*

>peptide 5 (32 aa)
MSAGLLVVSATPYHVWSNFENLKIMIPRSCPT*

>peptide 6 (38 aa)
REGIARSSPSKQLKHKIYPKVNLFITSNETAVPATITQ*

Sequence

>CNT30180697
GCAGAGAAGGAATAGCAAGATCATCGCCAAGCAAGCAACTCAAGCACAAGATTTACCCGAAAGTTAACTTATTCATTACTTCAAATGAAACTGCTGTACC
AGCAACCATAACACAGTGACACAATATAGTTCATTAAACCAACATAGGACTGACACGAACGAGATACGTAGTTCAAATGAACGGACACTACGGACGACCA
AGGATAAACCAGCAGGTCCAACGCCAGGGCAATTACTGACCACCACGGAGGCGGAGCACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCAA
GGGTGCGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAAT
GGTGTCAGACGACTCCACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCTCCCCGAAGGCGGAGGACAAGGTGGAGGGTG
GACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGT
CCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCAGAGCTCTCGACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATCTGCAG
AGAAGAATCCCAAAACAGAATGGTTAGGTTCAAGAAGCAGACCAAGCAAACTAATGTGACAAATACTAAAAACATTAGGTAAGCTATCATACAGTAGAGA
TTAAACAAACAGCAGTAGCATATTTTTTTTCAGTAACATACGGTAGGTGCATGCTAGTGACCACAAAAAAACTAACAGCAGTGCTAGGCGGACAACAAAA
TATGGACGAACAGCGCACGACGATGAAATCCAGCCAGGAAATCTCATCCACAGCAGTGCAATGTCCGCTGGATTGCTTGTAGTATCGGCCACACCATATC
ATGTGTGGAGCAATTTCGAAAACCTAAAGATTATGATTCCACGGAGCTGTCCAACATAGCTTTTTTTCCAAGAAAAATCAATCTACAGACGGTAGATAAT
AAACAAAGGGCAGCAGCTTATTTTCTTCATTGAACAGAACCTAACAAACGGTAAGTACATGCAGATGCATCAAAAATCTGAAGATCAATTATCTCAAGGA
TTCCACGTAGCTGTCGGACATGCTTATATTATATAGCAAAGGAAGAAGCCTAGCTTTTTCAGGGGAAAATCAACTATAACCCTAAGCCTAGGTTAGGACT
ATCTCGGTAGAACAAGAATATGATCACGAGCTACAGATCAGGCAGATTATGCGGCTACCATTTAATTCAATCATAAAGAGTTATGCGGATCTATCAAGCA
GGAGCGGACGAACTAGTAGATAAAACACGCATACGAGCCTAAACGGCTTAATAAGGAATTAATTGACCGAAACACGAACAGATCTGCCCCTTCAATCAAT
CTATCTACACGCAAAAATCCCTGAGAATTCGCCAGAGCTTCGAAGACCTAACATGCGCGAACAGATCGGGCAACAAGAACCAGATCGGAGCAGAAATCGA
CGAGATTCCACAATACTACACCTCCAACCATCTAATCAACGCAGATCTAGACGACACAGAGAGAGGGGAAGCAAGCGCCGTACCTTGAGGCGGTGGGGGA
TGAGGATTCGACGAGCCTGTTGTCGACCGGAGACGAGATTGGCTGGTTCCGTTCCTG