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Detailed information on CNT30386702


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 4e-101

BLAST vs NONCODE:
NONMTRT002043, E-value = 1e-66

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30289038Triticum turgidumTriticum aestivum97.9498.8999.3712forward
CNT30225503Triticum turgidumHordeum vulgare54.6159.7994.71397forward
CNT30659411Triticum turgidumTriticum dicoccoides98.2194.299.72714forward
CNT309808Triticum turgidumZea mays59.8330.0890.11435forward
CNT30581037Triticum turgidumEchinochloa crusgalli62.459490.97454forward

Expression of CNT30386702

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVMVLPVRVFTK

>peptide 2 (44 aa)
MPSLSWILALTLSMVSELSTSRVMVFPVRVFTKICMPPRRRRTR*

Sequence

>CNT30386702
GTAGGCTCAAGCAAGCAATTCAAGCGCAAGCAATGAACAGATATGAGTAAGATCATTGCCAAGCAAGCAACTCAAGCACAAGATTTACCCGAAAGTTCAC
TTATTCATTACTTAAAATGAAACTGCTGTACTAGCAATTTCGCAAACCAACACGTAACAGTGATTCGGTAGTTCATTAAACCCAACATAGGACTGACGCG
AACAAAAAACTGTTCAAATGAGCGGACACAACGGACGACCAAGGATAAACCAGCAGGTCCAACGCCAGGGCAATTACTGACCACCACGGAGGCGGAGCAC
AAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCCGGGGGG
ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCTCTCAACCTCCAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGA
TTTGCATGCCACCACGGAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGACCATCCTCCAGCTGCTTGCCAGC
GAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTAATG
GTCTTGCCTGTGAGGGTCTTCACGAAG