Detailed information on CNT30234302


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373593Brassica oleraceaArabidopsis thaliana41.8912.5892.4793forward
CNT30312005Brassica oleraceaCamelina sativa29.7311.392.4266forward
CNT3062249Brassica oleraceaArabidopsis lyrata42.7913.9391.5895forward
CNT3076824Brassica oleraceaBrassica juncea31.9813.3792.9671forward
CNT30612636Brassica oleraceaArabis alpina40.9935.8392.3191forward
CNT30478446Brassica oleraceaArabidopsis halleri42.7918.4893.6895forward

Expression of CNT30234302

Peptides detected in this lncRNA

>peptide 1 (72 aa)
TCVVPNLDGSMRVPFAIVDGDTLDVVLISPSLVVFLRRSFQRNLSHICSRRRHLSLNNLLCVVSKVRVFFRFV

Sequence

>CNT30234302
CACATGTGTAGTTCCAAATCTTGATGGCTCCATGAGAGTCCCATTCGCCATCGTGGACGGTGACACCTTGGATGTGGTTCTCATTTCTCCATCGCTTGTA
GTGTTTCTCCGCCGATCCTTTCAACGGAACCTCAGTCACATATGTTCCCGACGTCGCCATCTCTCTCTTAATAATCTTCTTTGTGTTGTGAGTAAAGTGC
GTGTGTTTTTTCGGTTTGTTTC