Detailed information on CNT30612636


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373593Arabis alpinaArabidopsis thaliana71.2624.4990.06181forward
CNT30234302Arabis alpinaBrassica oleracea35.8340.9992.3191forward
CNT30312005Arabis alpinaCamelina sativa5021.7587.4127forward
CNT3062249Arabis alpinaArabidopsis lyrata70.8726.3989.44180forward
CNT3076824Arabis alpinaBrassica juncea71.2634.0986.74181forward
CNT30478444Arabis alpinaArabidopsis halleri71.6567.1691.21182forward

Expression of CNT30612636

Peptides detected in this lncRNA

>peptide 1 (74 aa)
AAIFLLNFMYSMGSVPNLDASMRVPFAFVDVNTLNMVANGVGEEVVLTLPPLVVFLRRSFQRNLRHICSPCRHL*

Sequence

>CNT30612636
GGCAGCAATTTTCTTGCTCAACTTCATGTATTCGATGGGCTCAGTTCCAAATCTTGATGCTTCCATGAGAGTCCCATTCGCCTTCGTGGACGTTAACACC
TTGAATATGGTGGCCAACGGCGTCGGGGAAGAGGTGGTTCTCACTCTTCCACCGCTTGTAGTGTTTCTCCGCCGATCCTTTCAACGGAACCTCCGTCACA
TATGTTCCCCATGTCGCCATCTCTAGCTCTCTCTTGTTTTTTTGTGTGTATGAG