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Detailed information on CNT30214836


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526651Helianthus annuusPhaseolus vulgaris23.2324.1687.572forward
CNT30632205Helianthus annuusVigna unguiculata23.2311.5886.1172forward
CNT30711330Helianthus annuusGlycine max46.7747.8584.83145forward
CNT3084328Helianthus annuusVigna radiata47.7448.6881.08148forward
CNT30145967Helianthus annuusMedicago truncatula46.7749.3283.45145forward
CNT30175714Helianthus annuusVigna angularis23.2323.6888.8972forward
CNT30724469Helianthus annuusLupinus angustifolius47.7448.5282.43148forward

Expression of CNT30214836

Peptides detected in this lncRNA

>peptide 1 (46 aa)
LGLVALACNPSGGVKVGRTVCWFGLVRFGLIVLNPACPFQVESWSM*

Sequence

>CNT30214836
ACTGGGCTTGGTAGCGCTTGCCTGTAACCCAAGTGGGGGTGTTAAAGTGGGTCGGACTGTGTGTTGGTTTGGTTTGGTTCGGTTTGGCTTGATTGTGCTA
AATCCGGCTTGCCCGTTCCAAGTTGAGAGTTGGTCCATGTGACTTGAGCGAAGGCTCGGGCTACTTGGTCCCTAGACTAAGGGGCACTGCGTTAGGCTGG
CTTCACAGAGCTGCGAGAACCCTTGGCTCTTGACAGTGGAAGGATAACAGGCTTGGGGCTCATCAGGTCAATGTAGCCGACTTATCCAACTCAAATGAAC
ACCCACTTTT