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Detailed information on CNT30632205


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316252Vigna unguiculataCorylus avellana11.5820.3490.2872reverse complement
CNT30379183Vigna unguiculataManihot esculenta18.8141.283.76117reverse complement
CNT30710185Vigna unguiculataGlycine max21.744.4185.19135forward
CNT30566737Vigna unguiculataActinidia chinensis8.220.4892.1651reverse complement
CNT30509042Vigna unguiculataSolanum lycopersicum12.3825.1684.4277forward
CNT30171622Vigna unguiculataTrifolium pratense22.9947.3583.92143forward
CNT30145967Vigna unguiculataMedicago truncatula22.1946.9486.96138forward
CNT30214836Vigna unguiculataHelianthus annuus11.5823.2386.1172forward
CNT30478989Vigna unguiculataArabidopsis halleri10.1320.5988.8963forward
CNT30410045Vigna unguiculataPapaver somniferum9.9720.9588.7162reverse complement
CNT30176739Vigna unguiculataVigna angularis41.4883.586.43258forward

Expression of CNT30632205

Peptides detected in this lncRNA

>peptide 1 (32 aa)
WRKQKWRNKPQFPTQDSLFLTLPSEVPHRSEY*

Sequence

>CNT30632205
TGGAGAAAACAGAAATGGAGGAACAAGCCTCAGTTTCCAACTCAAGACTCCTTGTTCTTAACATTGCCATCTGAAGTTCCACATCGTTCAGAATATTAGA
TGAACTAGTCTTTATATATGATCTGACAGACATGTCAGTTCGCCGAGCTGGGTAATGTCAGCTTATGACCCAAGTGGGGGCATCAGGGTGACTGGACAAG
GCTTTAGCTTGCTGAGCTGACCTATGGGTTGCATTGTGCTTGCTTGCCCACTCCAAGTTGAGAGTTGAGCCATGGGATCTTTGCGAAGGCATTGGTTTCC
TGGTTCCTAGACAGGAGGGCACTGCGTTAGGCTGGCTTCACAGAGCAGCGACTACCTCCGGTTCTTGACAGTGGAGGGACCACAGGCTGCCGCACCTCTA
TGTCACTAAGCTTGGTGAGCCCAGCTCTTGAACTGCCACCTTTTTTCATTTTTCCACCACCGTTAACAAGCTTAGCTTCTTAGATGAGAAACAATCACGC
TGCATTCATGATCTCCAAATAGCTGTTGATCAGAAACAGAGTTTCCCATAGATGTTATAGTCTATTGTTTATTATTCAATTATACACATGGACACGAGGG
GTGACACAATGAAAAACATTTT