Detailed information on CNT30175714


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30200314Vigna angularisPisum sativum31.9141.9986.697reverse complement
CNT30710185Vigna angularisGlycine max58.2258.2284.75177forward
CNT3084361Vigna angularisVigna radiata10099.3593.42304reverse complement
CNT30172405Vigna angularisTrifolium pratense32.2443.1789.898forward
CNT30214836Vigna angularisHelianthus annuus23.6823.2388.8972forward
CNT30619930Vigna angularisCajanus cajan53.2926.9685.8162forward
CNT3024649Vigna angularisPopulus trichocarpa24.3424.590.5474forward
CNT30725324Vigna angularisLupinus angustifolius27.341.2993.9883forward

Expression of CNT30175714

Peptides detected in this lncRNA

>peptide 1 (41 aa)
PSWVTSACDLSGGFKVIEQGYGLLSWSGSCILLACPLQVRS*

Sequence

>CNT30175714
GCCGAGCTGGGTAACGTCAGCTTGTGACCTGAGTGGGGGCTTTAAGGTGATTGAACAAGGCTATGGCTTGCTAAGCTGGTCTGGAAGCTGCATCTTGCTG
GCTTGCCCACTCCAAGTCAGGAGTTGAGCCAAGGGACCTTTGCGAAGGCATAGGTTTCCTGGTTTCTAGACAGGAGGGCACAGCGTGAGGCTGGTTTCAC
AGAGCAGCGATAACCTTCGGCTCTTGACAGTGGAGGGATAACAGGCTGCTGCACTTCCAGCCCTAATCGGGCTTGGTGAACCTTGCTCTTGAACAATCAT
TTTT