Detailed information on CNT3014940


BLAST search results

BLAST vs Swiss-Prot:
sp|A2Y0H2|Y5513_ORYSI, E-value = 2e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30286021Zea maysTriticum aestivum30.156.9282.18101forward
CNT30473984Zea maysSaccharum spontaneum30.459.0387.25102forward
CNT30130910Zea maysLolium perenne24.7811.2285.5483forward
CNT30367958Zea maysSorghum bicolor62.6918.3781.43210forward

Expression of CNT3014940

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MQFTFHFIFYWEGMGCISGAAATSATGYLNTRASRSVATAFPRLAPSRTAELYLAESCAAVGRTALVTE

Sequence

>CNT3014940
ATAAAACAAAGACGAACTTGTGTAGGCTCACTGCAACAAAAAGGAATGAAACGATACTGAACCACGCATGAGTTCACCATAAGGTACGCAAAGACAAAAC
ACAGTAATACTTCTTGATATTGGTTTATGCAGTTCACATTCCATTTCATCTTCTACTGGGAAGGAATGGGCTGCATCTCTGGTGCTGCAGCAACGTCAGC
CACGGGGTACCTGAACACGCGGGCGAGCCGCTCAGTGGCCACGGCGTTCCCGCGCTTGGCACCATCACGCACCGCCGAATTGTACCTGGCAGAGAGCTGT
GCGGCAGTGGGGAGGACGGCCCTGGTGACCGAGGG