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Detailed information on CNT30286021


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3014940Triticum aestivumZea mays6.9230.1582.18101forward
CNT30679464Triticum aestivumTriticum urartu17.7538.294.21259forward

Expression of CNT30286021

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MRLEIRSTEQLGTPVAKNNSHELDRIINP*

>peptide 2 (31 aa)
MGCISGAVAGAVSAAGLAKTLAMRSVGTSGR*

>peptide 3 (35 aa)
MGDRLIANPISICPDRCKQNKRTSININSILPHTN*

Sequence

>CNT30286021
CCACTGTCCACCACAAGCCAAACAAGACACTACAACGAGATACTGACTCCTACAGCTATTAGGTAATAATAGAACTCCGGGTAGCTCTTATTGTTACTGC
GTCGGGATGGGCTGCATCTCAGGAGCTGTGGCAGGCGCAGTGTCGGCGGCCGGGTTGGCGAAAACCCTTGCAATGCGCTCAGTTGGGACGAGCGGGAGGT
AGGTGGCGACGGAGTTGCCACGCTTCGCGCCATCAAGCACGGCAGAGTTGTACTTGGCTGAGAGCTGTGCTGCCGTGGGGAGGACAGCACGGGTCACCGA
GGGGACGAGCGGGAGGCGGTTCAGGGCGGCCCAGGCTCATAGCGGGTATACAAGTCACGGGCCTTTGGCTCAGCACGAGCAATGGCCGACTTGGCCAGGC
CAGTTGCTGTGCCCATTATGCCTGTCTTCTGCACCTCAGCTGCTGCAGAGCGAGCATAGGTCGGCACCTCTTTCACGACCGGCGGGACACGACGATCCAG
CTCCTGGACAGACTCGTCGACCTGCAAGGCACAAGCACATGCAAACATTAGTTGCTTGAATAGCAATCAAATGATTTAAGATAAATGCATGGTGGACATA
TAAAAATGAACTTGCCTCATGCTAACCAAGAAATCAGTTGCAAGAACTAGCAACAACTGAATTCAAATGCCCATGTTATGATACTGGTTTTTACAGGACA
TCCCGTATACAATTATATGCTATTGTGTTCCTAAATTGGACATAAATTGATTGATGCCCACGATACTGGATGTTGAACATATAGAAATGAAGAAACAGTT
TGACACTGCTTAAGGCTTGCCTCCCGCTAACAAATAGATAAGTTGCAAGAACTAGCAACAACTGAATTGAAATGCCTATGTTATTATGATACTGGTTTTT
TTACCTGATATCCCGTACAGAACTATATGCTTTGTGTTGATAAATTGGACATAAATTGATTGATGGGTGATAGGCTTATAGCCAATCCCATTTCAATCTG
CCCAGATAGATGCAAGCAAAATAAAAGAACCTCAATTAACATCAACTCAATTTTGCCCCATACCAACTAAAGATCCTACAATCCAACTCTACAGATGAAA
AAATGAAGCAGACAGCTGCCAACAACAAATTATAATTAGTGCCTAACAAGTCAGTTCCTCTGGTGTTCATACATGGTATGTGATCAAAAGATGGGGAAAA
CAACTTGATTTGTAGGTATCAAATTATCTGGACATCATCTGTAGTACTTCGCAAAACTAGACTAATAACAGGATAAAGTGATAAAACCAATACACCATAA
CAGGATAAAGTGTTTCATCCGCATAACGACTCATGCGACTTGAAATCAGGAGCACAGAACAACTAGGTACTCCTGTGGCGAAGAACAACAGCCATGAACT
GGATCGGATAATAAATCCTTGATACAGCTAAGAAATCAAGCTGAGTTTCTCAATCGTTC