Detailed information on CNT30148821


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30281965Brachypodium distachyonChenopodium quinoa23.676.2189.849reverse complement
CNT30202349Brachypodium distachyonPisum sativum55.077.8992.98114forward
CNT30491981Brachypodium distachyonOlea europaea49.764.7994.17103forward
CNT30609560Brachypodium distachyonGossypium raimondii36.719.1389.4776forward

Expression of CNT30148821

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MNNPVSNTGNNISKRTFSRASRHAELPKFLYIQKRN*

Sequence

>CNT30148821
TGACAAATAACCAACCCGCAATGAATAGGGAAGGTATAGTAATGCTATGAATAACCCAGTATCGAATACTGGTAATAATATCAGCAAAAGAACGTTCTCC
CGTGCTTCCAGACATGCTGAGCTCCCCAAATTTTTGTACATTCAAAAAAGGAATTGATTCCGTAAAAGATGGGATCAACCAGTAAACAAAAAATTACTGG
TATTTCA