Detailed information on CNT30491981


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020910Olea europaeaCitrullus lanatus2.7927.0396.6760forward
CNT3025537Olea europaeaPopulus trichocarpa4.725.3195.05101forward
CNT30148821Olea europaeaBrachypodium distachyon4.748.7994.06101forward

Expression of CNT30491981

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MGMPPNFLSNHIQTLLSIIHSCDGYLLVRLRPSKEFRTFCSHLELALKSSKYREDCSRHTR*

>peptide 2 (55 aa)
MSSLDSLELLCHILGQILDFLMFHKSGTKKERCPYVLQRKGQSLYIQYHSTHSCR*

>peptide 3 (45 aa)
MRRFQSLDHKTIFDSILAKRKMWLERQLILEDFKDYEIEIFIHRA*

>peptide 4 (44 aa)
MLHAGWLDQTYNLKQKILSRKPPSSSLDPRGSGAFHPFSPPPSD*

>peptide 5 (87 aa)
MDTVIYLLNRRVDAGDVDNEFEHNMLTQSFTILMKFICHNIEHTAHLITSTFAKAGLLFHLAGDLKIDLGTFIYNQICGFAIKLEHY*

>peptide 6 (85 aa)
LFYWVGVFNPSTPGLFSLNSPFPTYSLKTNSSSPLLEHTLFTHSQITWALYKRVHYNNNPQPRNSLAQIPHSQVILSRPIPHLLF*

>peptide 7 (32 aa)
MSSMQISIARLTILGQSVNITLGYETSGFCSS*

Sequence

>CNT30491981
CTCTTTTTTACTGGGTTGGGGTTTTTAACCCTTCAACCCCAGGACTCTTTAGCCTAAATTCCCCATTCCCAACTTATTCTCTCAAGACCAATTCCTCATC
TCCTCTTCTAGAACACACACTCTTTACTCACTCTCAAATTACTTGGGCATTGTACAAAAGAGTGCATTACAACAACAACCCCCAACCTCGGAACTCTTTG
GCCCAAATTCCCCATTCCCAAGTTATTCTCTCAAGACCAATTCCTCATCTCCTCTTCTAGAACACACACTCTTTACTCACTTTCAAATTTACTTGGGCAT
TGTACAAAAGAGTGCATTACAACAACAACACACAAGTTATAACCACTTTTCTCCACAAAAATTCAAGAAGAGTAAGCTTGCGGCCGTAGGTTGCAGCCAC
AGTCCCTGCATTGCGTCCCCTACTTCTCAGCATCAAGTCTTGTACATCCGGCTCCCATTTTCCTATCCATTATGTCATCTTTGGACTCATTAGAGCTATT
ATGTCATATACTTGGACAAATACTTGATTTTCTCATGTTTCACAAGAGTGGCACCAAAAAGGAAAGATGCCCCTACGTCCTCCAAAGAAAAGGGCAAAGT
CTCTACATCCAATACCACAGCACGCACTCATGTCGATGACAGAGGCATGAGGAGATTCCAGAGTTTGGATCATAAGACGATATTTGATAGCATCTTGGCC
AAGAGGAAGATGTGGCTAGAAAGACAACTAATATTGGAGGATTTTAAGGATTATGAAATTGAGATTTTTATACATAGAGCATGATGGGCACATGTGATTG
CAAAACCATGGGAGATTTACCCTACTTTGGTACATGAGTTCTATGCAAATTTCAATCGCTAGATTGACAATCCTGGGACAGAGTGTGAACATTACACTTG
GGTATGAGACAAGTGGGTTTTGTTCTTCATAAGGTTATTGGAGCATAATATGGATACAGTTATCTACTTGCTTAATAGGAGAGTAGATGCAGGGGATGTG
GATAATGAATTTGAGCACAATATGCTAACCCAATCTTTTACTATATTGATGAAGTTCATTTGTCACAATATCGAGCATACCGCCCATTTGATTACATCAA
CCTTTGCAAAAGCGGGGTTGCTATTTCACTTGGCCGGGGACTTGAAGATCGACTTAGGCACGTTCATATATAATCAGATTTGTGGGTTTGCTATCAAGCT
AGAGCATTACTAGACATTAATTTTTTCCGACCTCAGCAAGGGGATTTTCAGATCTTTTGGGGTCAGCTTCTTTCTGCGAAGCAGTTGACTTGGGCCAGTG
TTGCTATTAATTGTAAGATAGCAGATCATTTTTGGAGAGCTATCATACGAAGCAGACAGTATCAGCAGTAGGAGGAGGTAGCTGAAGGATATGGGGATGC
CACCCAATTTTCTCAGCAACCACATCCAAACCCTACTGTCAATCATCCATTCATGCGATGGTTATTTGCTAGTTCGACTAAGACCATCCAAAGAATTCAG
GACATTCTGCAGTCACTTGGAGCTTGCACTTAAGAGTTCAAAGTATAGAGAAGACTGCTCAAGGCATACAAGGTGATGTGAATGTGATACGTTTTGATGC
GTCCAGTACGAATAGAAGGAACGACATGCTTAGGAAGAGTATAAATAGATACTCAGGACGGATTGACGAGCTGAACATCGAGTTGATCAGACTAATGATC
TAGTTTTGAGACATCCAAGGCCAGGTTGATGAGACATATGACATGGTATGCTGCATGCAGGTTGGTTGGATCAGACATACAATTTGAAGCAAAAGATTCT
CTCGCGTAAGCCTCCATCATCATCTTTAGATCCACGAGGCTCGGGAGCATTCCATCCATTTTCACCACCACCTTCAGACTAACCAGTGGAGTTCTCAGGT
ATCCTCTTTGCCTTTCTTTTTTGCATTACTAATATCATATTATTGTACATTGAGGGGAATGCACAAGTTAAGTTTTGTGATAGATGGTTTTATCATTGAT
TTTGTATAGTTTACTGCTTTTGTTATGTTTGTCGATTGTTTAAAAAAAACCAACCTGCAATGAATAGGGAAGGTATGGTAATGCTATGAATGACCTAGTA
TCGAATACTGGTAATAATATCAGCAAAAGAACGTTCTCGTGTGCTTCCAG