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Detailed information on CNT30281965


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9MTK5|PSBE_OENEH, E-value = 4e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30148821Chenopodium quinoaBrachypodium distachyon6.2123.6789.849reverse complement
CNT30117202Chenopodium quinoaOryza nivara27.6311.780.28218reverse complement

Expression of CNT30281965

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MRLGNNYENRAQGSVVFMECRLLSQFIDFICM*

Sequence

>CNT30281965
TATGGTAGATAATGTAGAGATGGGATCTGAGTTCCTGGATGATTAGAATTTTTGTGATGTAAAAGAGAGTTTTGTTGACTGAAAGTTGTGAAAGTCAAAT
TGTACTTTTAACTGCTATGCTATTAAGTAGTTCAATATTGGGTTATTCACAGTATTACTATACCTTTCATATTCGTTGCGGGTTGGTATCCTCAGCATGA
GTTTAGCTTTATGATGTGTTTAGAAGCCCTCAACCAAACATATTTCATTGAGAGCCGACGAGGAATTCCTTTAATACCATTTTGAATCTGTGGAGCAGCT
GGATGAATTCAGTGGATCCTTTTAGGAGGCCCAATGACCATAGATAAAACCTGACTGGCTGGCTGGCTGTAAACTGACTCGCTGTATCTGCTCCTATCTT
TTTTGTGGTTAAAATCCACAATGCAGTGCATTACAGACTGTTTGTTCTGAACTACTGTTGGATAAAAGATTGTAGTAATGGGAGAGGTTAGATTACTATT
AAGACGCTCTTGATTCAGTGTGTCCTAGAATGCGTTTGGGGAACAATTATGAGAATAGAGCCCAGGGATCAGTTGTTTTCATGGAATGCAGATTGCTAAG
TCAATTTATCGACTTCATATGTATGTAAATCCAAATTTTCTGGTGTAATCTACTATCTTCATCTTGGTATCATATCTTAGCCGCATCACCATATCACGGC
TGCATTTTAATGGATTTTGGGATTACTGCAGCCAAAATTTTAGTTACAACAGCCACATACATTGCCTGCAAAAGTGGTATAGTCACTGT