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Detailed information on CNT30132332


BLAST search results

BLAST vs Swiss-Prot:
sp|Q00434|PSBP_WHEAT, E-value = 4e-76

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554351Lolium perenneOryza glaberrima19.5532.4491.24217forward
CNT30242255Lolium perenneAvena sativa55.77101.4892.89619forward
CNT30659934Lolium perenneTriticum dicoccoides9.0138.3192100forward
CNT30680245Lolium perenneTriticum urartu19.7347.194.98219forward
CNT30583062Lolium perenneEchinochloa crusgalli42.6160.8886.05473forward
CNT30557390Lolium perennePanicum hallii44.7773.0986.52497forward

Expression of CNT30132332

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MVEGNRPLVHPFLMYNQRNTHAHAPPLHVRCIPEQIFD*

>peptide 2 (37 aa)
AWVNPWMEREFVVVRMRHVNFDLIKRGRYTKKKHYYR*

>peptide 3 (60 aa)
MHMPLLYTYGASLSKFSIKFADRSIDGSHIYATLKDPAAFSTNFLAPLNHLLSPACALQT*

Sequence

>CNT30132332
GCGTGGGTGAATCCGTGGATGGAAAGAGAGTTTGTTGTTGTGCGCATGAGGCACGTGAACTTTGATCTTATAAAGAGAGGGAGATACACAAAAAAGAAAC
ATTATTACCGCTAAGATTTCTTAATCACTGTCCAGACATGAATGGTTGAGGGAAATCGACCTCTTGTTCATCCATTCCTCATGTACAATCAAAGAAACAC
ACATGCACATGCCCCTCCTCTACACGTACGGTGCATCCCTGAGCAAATTTTCGATTAAATTCGCCGACCGATCGATCGATGGGAGTCATATTTATGCGAC
GCTGAAGGATCCGGCGGCGTTCTCGACGAACTTCTTGGCGCCCTTGAACCACCTCTTGTCCCCGGCCTGCGCCTTGCAGACGTAGAGCTTGCCGTCGGCG
ACGGTGGCGGTGATGAGCTGGTGCTTGCCTCCCTCGTCGCCGTCCGCCGTCCTGGTGAGCACCGTTATGCTGTAGTACTGCTTCCCGTCCACCACCGGCG
CGGAGCTCTCGAGCACGTTGGCCGTGGAGGAATCCGACCTCGGAGAGGAACTGCTCAGGGGATCCGTAGTCGGTGATGGTCTTCTTGGTGGTGGGCTGGA
TGACGACGGAGAGGTTGCTGGTGGCGTCGAAGTTGTCCTCGTAGCGGAGCACCTGGCCGGGGAACTCACGCTCCTTGCTCGGGTTCCACTTGGCCGGGAC
CAGCAGCTTGAACCCCTCCCCGGTGTACGTCTTGAAGTCCGTGTTCTTCTTCGCCTTCCCGAACACGTTGGCTGCACACAGATCAAACATTCATGCATGC
ATATTTCATTCACCCGAAACGAGACCGTCTCGTCTGAATAGGCGTTCTTTCTTCGTACCTGCTTCTCCGTAGGCGGCGGCGGCCGGTGAGACCTTGACGG
CGACGGCGGCAGCGCCGGCGAGTAGTGACAGCGCGGCGCGGCGGCTGGTGACGACGGCCGAGGCGGCCAGCCGCGCGGTGGACTGGTGGAGGAAGCAGGA
GGTGGACGCCATTGCTGCTATCTGCTGTCTGCTTAGCTTAGCTTAGGAGTGTGCGTGCGCGTGGGTAGGGTGTGTGTCGCGTTAACTAAGGAGATCGGTG
GGGTCGGGAG