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Detailed information on CNT30131032


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 7e-49

BLAST vs NONCODE:
NONSTUT000620, E-value = 2e-15

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30299368Lolium perenneTriticum aestivum57.9259.7893.53278forward
CNT30393934Lolium perenneTriticum turgidum55.6258.6893.26267forward
CNT30239924Lolium perenneAvena sativa67.9279.7192.33326forward
CNT30666113Lolium perenneTriticum dicoccoides58.3355.6793.57280forward

Expression of CNT30131032

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICI

>peptide 2 (82 aa)
MARHLLATTEAEHQVEGGLLLDVVVSEGAAVLKLLASKDEALLVRGDALLVLDLRLNVVDGIRGLDLEGDGLAGEGLHEDLHL

>peptide 3 (34 aa)
QRDRQTQQNFTLSSRFNYSFITVQPKLLHHSRSL*

Sequence

>CNT30131032
CAAAGAGATAGGCAGACACAACAGAATTTCACACTAAGTTCAAGGTTCAATTATTCATTCATCACAGTTCAACCAAAGCTGCTGCATCACAGCAGAAGTT
TGTAAATACAAGTAAAGTAGACATCAACACCACAGAACAAAATACATGACCAGATAAGAGGACACAATGACAGCTCCACTGGAGCACACCAACAGCATCA
GACTTATGAACCCACAGAAATAAGCAGCTCCATGGCTAGGCACCTACTGGCCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTT
GTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTA
ACGTTGTCGATGGTATCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATCTG