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Detailed information on CNT30120571


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3094050Citrus clementinaSolanum tuberosum6.7120.0592.580forward
CNT30538793Citrus clementinaBrassica napus6.9621.596.3983forward
CNT30605418Citrus clementinaGossypium raimondii7.0529.6894.0584forward
CNT30652446Citrus clementinaRosa chinensis6.8826.5492.6882forward
CNT30115234Citrus clementinaEutrema salsugineum6.9620.3492.7783forward

Expression of CNT30120571

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MPRSNSGPEDEKQCLVGFPVILVHRLVLSCGCPYKNCTVEMIDYDICLNMK*

>peptide 2 (35 aa)
MKGLNFIGILNLNLSFKNQRKSFQEKNYCNRQIST*

>peptide 3 (31 aa)
MSEPLDKSDLLSTQMKCQGPTLDRKMRNSVW*

Sequence

>CNT30120571
ATTCCCCTTTCTTGCTAGGGTTTAAGTATAAATAAATGCAAACCCAACACATTTTCTTCCGTTTTACCTAGGCTTTCGAAGGCCACCGAGAGAGAATCTG
TTAGTCTTTGCAAGCCAGTCACCATGAGAGCCAAGTGGAAGAAGAAGCGCATGAGGAGATTGAAGAGAAAGCGCCGAAAGATGAGACAGAGATCTAAGTA
GAAGAAGAATAAAACACCTCCCTTCCTCTTTCTCTCTCTTCAGAGGTCATCAGTCTTTAGCCTAATTTTGTGGAATGATGGTTCTACAATTGCCCTGTTG
AAAGCTATTCTGCTTGAGTTTCCATATCCTAGTCCCCTTGTAGACCTTATTTTTGAATGTGTTGATAGAGCCAAAGCTATTTCCAGCAAGTTTAGTGTTG
GATCTATATCATATGTTTTGCTGTGAGAAAATTCATTCAACCCCACAAGATGATGGGTGAACTTCCTTTGTGCGGCCATGCTTACTGCATTTGGCTGGAA
TAATGAGTGAGCCTCTGGACAAATCAGATTTGTTGTCCACTCAAATGAAATGCCAAGGTCCAACTCTGGACCGGAAGATGAGAAACAGTGTTTGGTAGGT
TTCCCTGTCATTTTAGTCCATCGATTGGTGTTGAGTTGTGGGTGCCCTTATAAAAATTGCACTGTTGAAATGATTGATTATGATATTTGTTTAAACATGA
AGTAAACCAGGCAGTTGTATCATAATGAAATTTCAGGCATTTCTCCCCGTGAAGAAATCCTTTGGGTAGATAAGCATTCAATGGTGCAAGTTGGGAGTCG
GTGATGATGCTGCAAATCTGCAAAGGTCTGCAATGAAGGGGCTCAATTTCATTGGTATACTCAACCTGAATCTGTCTTTTAAGAATCAAAGGAAATCATT
TCAGGAGAAAAATTACTGTAACAGACAAATTTCTACCTGAAATAGGGGGGTATTGCAAACTGCGGCAGGGGTGATCAACAATCTTGACGTTTTTCGTTAT
TACTTTCATTGTTGCCACTACTCTCTGAAGATTATTAACGGATTTCTAGCAGATTGTTAAATCATGTCAATTGCATCAGTGAATTGATGAAGAGTTGCAA
TAAATTTGAATTGGCACTGCAATGAATTTTTTTTTTGAATTACATAAAAAAATTGTTCAAATTATTACATGAGACTGACAGTGATACATTTA