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Detailed information on CNT30115345


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30615599Eutrema salsugineumSesamum indicum11.3123.0289.6658reverse complement
CNT30539885Eutrema salsugineumBrassica napus31.7735.2192.64163forward
CNT30237627Eutrema salsugineumBrassica oleracea38.7915.6991.46199reverse complement
CNT3082983Eutrema salsugineumBrassica juncea38.48.292.89197forward
CNT30574483Eutrema salsugineumVitis vinifera20.6623.0987.74106forward

Expression of CNT30115345

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MCPIYSSLYQPPLFFIFMDKFRIFSYLGFTYTILLSRVIL

Sequence

>CNT30115345
TCATAATAAAAAAATATATTAAATTTTGTTGCGAAATTTTTCGAATACAGACAAAAATCTTCGATAGCAAATTGATCGGTTAATTCAATAATAAATGGGA
GTAAGCACTTGATTTCGTTGGTAGCACCCAAGCGAATGTGCAATTCAATTTTTTACTTCTTCAATTTCAATGAAGGAATAGTCATTTTCAAGCTCAACTA
ACCGAAACCTAGTTTTCAAATAAAAAATATATGAATAAAAAATAAAAATTTTGCGGAAAGTCTTTTATTTCTTTATCATATAAAGGCAAGACTTTTTTTT
ATCTAGCGAATTCAAAGCGGAACTCTATTTATGATTCATTATTTCAATCTCATTAACCTTTTTTTCATATTTTCATTTTAGCATATCCGGTTATGTGTCC
CATCTATTCATCCCTTTATCAACCCCCCTTATTTTTCATTTTCATGGATAAATTCCGCATATTCTCATATCTAGGATTTACATATACAATATTACTGTCA
AGAGTAATTTTAT