Detailed information on CNT30113844


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01861|PAL1_PEA, E-value = 2e-60

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519668Ficus caricaSetaria italica3.7123.8487.882forward
CNT30710196Ficus caricaGlycine max13.0940.5981.66289forward
CNT30355311Ficus caricaLactuca sativa5.8439.2186.05129forward
CNT30571517Ficus caricaVitis vinifera14.7258.0482.77325forward
CNT30725977Ficus caricaLupinus angustifolius13.5453.381.61299forward

Expression of CNT30113844

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MKYTLKKIKHEKARDSLKKNVEYHSFYHNSHEMICAILDKMDVNIKPSFNKLL*

>peptide 2 (45 aa)
MVKIIIIKIIIIIIISVYRTQNWKVENTGPKTQEQNVKGMFGELV*

>peptide 3 (46 aa)
MRERERESQTATRVDWLKINSDCSMYHGGIVSTALILATWTPGGPWQ

>peptide 4 (36 aa)
MRGGAEAGGDTIAVSTLVHAVHNPVTAGLDAFPRRL*

>peptide 5 (34 aa)
MLSITQSLLALTPSLAASDSSTLTPPSCPAIAAT*

>peptide 6 (32 aa)
MMKKVQFSLNRTNNQTPPKFWGYFLLVFFFFG*

Sequence

>CNT30113844
CAATTATAATTTGGCGGGGTGGTAGGTGGGAACAGCTTACTATAATTTAATTTAGTCCATGCCTTTTCTCGCCTTTTTTTTTTTTTTTCCTCATTGAAAA
TGTTGTGGCACAAGGTAAAAAAGTTAAAAAAATATATGAAAAACAAATGGTCAAAATAATAATAATAAAAATAATAATAATAATAATAATAAGCGTTTAT
AGAACCCAAAATTGGAAAGTTGAAAACACCGGACCCAAAACACAAGAACAAAATGTTAAGGGGATGTTTGGTGAATTAGTTTAGTTTAAGATTTTTAAGT
TTCAATAGTAATTTTTCAGAAAAGACAAAGAAATTTTTCAGAAAAGACAAAATTTTTTTTCAGAAAAAGACAAAAAATATGATGAAAAAAGTACAGTTTA
GTTTAAACAGAACTAACAACCAAACACCCCCTAAATTTTGGGGTTATTTTTTGTTGGTTTTTTTTTTTTTTGGCTAGCTTTGTACAAAATCCAACTTCAA
AATCGGATCATAAATATTGTCTAAACTTGTAGGTCTCATAAAAGCTATCTTAACGTCGATTTGAGAGAGAGAGAGAAAAAAAATACATTTATCTTGTTTC
CAAAAAACGACAGTGCCAGTACAGCTCCTTATAACTAATTGACCACCTCCTAAGCACTATTAAGCCCTTCATTAAAAAAAAAATAATTGTAGAATTATTT
TGTATAATTTTCAGATGGTAAACCACACGACCCATAAAAAAAACTTTCTTCTTGAAAATAATAGAGGAGTCTAGTTTTTGTTAAAAGTACTGAAGAGATA
ATGAGATCTATAAATATTAGAGGACTAGATTTATTTTCTATTAAAAAATGAAATACACGTTAAAAAAAATTAAACACGAAAAAGCACGTGATAGTCTTAA
AAAAAATGTGGAGTACCACTCTTTCTATCACAATTCACATGAAATGATTTGCGCAATATTAGACAAAATGGATGTTAATATTAAGCCCTCTTTTAATAAA
CTATTATAAATCAAAATATTTTAACTCATTTTTTTTTTTTAAAACAAGTCAATAAATTTTTAACTAGTTTCTGAAAAATCATATAATTTCAATCTAAATA
TTTTAATTCAAACTGACCAACTAAAAACATGATAAGTAATGTTCGACTTTACAATTCACATTTCACGTGAAATCTTGTGACTTATAATACTTTTTAGTTT
GAATCGACCATTTTTAGGATTTACGTGTGTAGGTAATGATATACTCCACATAAAAGTATTATAAGTAGATAGACTCACGATTAATATTTACCTAATATCA
CTCACGATAATAGCACTTCTAAAAAAAACCAAGAAAGTAAATATCACGCTTAGTAATAATAATATTACCTAATGAGCTCATTCTGGAGAGCACCGCCTTG
CTTGGTTCTCCGATGAGAGGTGGCGCCGAAGCCGGTGGTGACACCATAGCTGTCAGTACCCTTGTTCATGCTGTCCATAACCCAGTCACTGCTGGCCTTG
ACGCCTTCCCTCGCCGCCTCTGACAGCTCCACCTTAACCCCGCCGTCGTGTCCGGCGATCGCCGCCACCTGAGATATCGTCAGCGTCTCGCCTCCGAGCT
TCACCACCGGCTTCCGGTACTCCTCCACCATCCTCTTTACCTCCTCCAGGTGACTCCCCTTCATCGCCTCCGCCGCAGCTCCCCAGTTCAGTGGGTCGCC
GGCGGCAACTCCGCCGCCGCTCTTGCTGCCGTTGCTGAGGCAAAACCCCTCCAACGCCGCCGCTCCGTTCTGCACGTGCCCATTTTTCTTCACGACGGTC
TCCATTACTGCTCTGTTTTTTTTTTCTTTTTTTTTTTGTTGGGCTTGGTCGGAGGTGTTGGAAAGTTAGAGAGAGAAAGAGAGAGGAGAGAGAGAGAGAG
AGGAAATGGAAGTTGTTGTTGTTTGGTTGGGGGTGTGTGGATTTCCTGAGGAGTAGAAGGAGAAGAGAAAGGGTGTTTAAATAGAGGGGAAAGAAAGACT
GGGTTTGGCTTTTCAAATACGATGGCGCTATGACTTTGGGTTTGGTAGGTAAGCATTAGAGAGAGATGAGAGAGAGAGAGAGAGAGAGTCAGACTGCTAC
AAGGGTGGATTGGTTGAAAATAAATTCTGACTGTTCGATGTATCATGGGGGGATAGTATCAACGGCTCTGATTTTGGCTACGTGGACACCGGGTGGACCG
TGGCAAAG