Detailed information on CNT30519668


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671140Setaria italicaSetaria viridis35.4733.52100122forward
CNT30628398Setaria italicaVigna unguiculata21.513.9186.4974forward
CNT30710196Setaria italicaGlycine max21.5110.3987.8474forward
CNT30396991Setaria italicaTriticum turgidum20.3518.6788.5770forward
CNT30113844Setaria italicaFicus carica23.843.7187.882forward

Expression of CNT30519668

Peptides detected in this lncRNA

>peptide 1 (80 aa)
AEAGGDAVAVGAVHHAVHDPVAAGLDALAGGLVELDAGLTGARGHGGHLRDAQAVAVKGADEAGLALHCSGTEGELEQKQ*

>peptide 2 (42 aa)
MLFMTQSLLALTRSRADSSSSTRASPAPAATAATCAMLRPSP*

Sequence

>CNT30519668
GCGCCGAAGCCGGTGGTGACGCCGTAGCTGTCGGTGCCGTTCATCATGCTGTTCATGACCCAGTCGCTGCTGGCCTTGACGCGCTCGCGGGCGGACTCGT
CGAGCTCGACGCGGGCCTCACCGGCGCCCGCGGCCACGGCGGCCACCTGCGCGATGCTCAGGCCGTCGCCGTGAAGGGAGCGGACGAGGCCGGTCTCGCA
CTCCATTGCAGCGGCACAGAAGGTGAACTCGAACAAAAGCAGTAGAGACTAGTAGTTGGGGGAACACAACAAGAGGAGTAATGCTACTAGCGTATTATTA
GTATAGCTAATTGCGTGACTGTGTTGTAGAAGAAGAGCTTGTGG