Detailed information on CNT30355311


BLAST search results

BLAST vs Swiss-Prot:
sp|O04058|PALY_HELAN, E-value = 5e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700904Lactuca sativaQuercus lobata24.3217.7883.7580forward
CNT3069052Lactuca sativaQuercus suber24.3217.0983.7580forward
CNT30113844Lactuca sativaFicus carica39.215.8486.05129forward

Expression of CNT30355311

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MQNSVATPFTCPFSINATVLWIDLATSCIVS

>peptide 2 (34 aa)
NELLLKSTALLALAVSDSSTFTVELSPAAAIPAT*

Sequence

>CNT30355311
CTAATGAGCTCCTTCTGAAGAGCACCGCCTTGCTTGCCCTAGCAGTCTCCGACAGCTCCACCTTCACAGTGGAGCTATCACCGGCAGCAGCAATACCCGC
CACCTGAGACACCGTCAACGTCTCTCCTCCGAGCTTCACAACAGGCTTCCTGAACTCCTTCACCATTCTCTTCACCTCATCAAGGTGGCTCCCCTTCAAT
GCCTCCGCTGCAACTCCCCAGTTCAAGGGATCTTTAATGCAGAACTCGGTCGCCACTCCATTTACATGCCCGTTCTCCATTAATGCAACTGTACTTTGGA
TCGATCTAGCTACCTCTTGTATAGTGTCT