SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 2749 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30524299 Setaria italica VIII:4217627-4218544 (+) coding (0.088)1e-31 (sp|F7J0N2|RGA5R_ORYSJ) 99 1.32 1
CNT30524298 Setaria italica VIII:11460697-11461201 (-) noncoding (-0.157696)- 100 0.89 2
CNT30524297 Setaria italica VIII:38914245-38915840 (+) noncoding (-0.004096)- 85 1.96 5
CNT30524294 Setaria italica VIII:40243729-40262421 (+) coding (0.157)- 79 8.08 2
CNT30524292 Setaria italica VIII:13252095-13252302 (-) noncoding (-0.0004096)- 34 71.33 1
CNT30524291 Setaria italica VIII:8644243-8644563 (-) noncoding (-0.036864)- - 3.94 1
CNT30524289 Setaria italica VIII:34740728-34742017 (+) noncoding (-0.057344)- 48 21.1 1
CNT30524288 Setaria italica VIII:14398629-14403591 (-) noncoding (-0.053248)1e-86 (sp|Q53QK0|Y1103_ORYSJ) 50 0 4
CNT30524287 Setaria italica VIII:37535754-37536847 (+) noncoding (-0.0487424)- 85 14.98 2
CNT30524284 Setaria italica VIII:33200781-33202004 (-) coding (0.207)- 58 16.17 1
CNT30524283 Setaria italica VIII:23393256-23400774 (-) coding (0.148)- 90 26.77 2
CNT30524281 Setaria italica VIII:9897248-9903609 (-) noncoding (-0.0339968)4e-21 (sp|Q9C810|Y1342_ARATH) 70 5.39 4
CNT30524280 Setaria italica VIII:29957674-29958529 (-) noncoding (-0.0192512)- 59 10.15 1
CNT30524279 Setaria italica VIII:33904526-33942328 (-) noncoding (-0.139264)5e-23 (sp|Q2R8L1|RGA5S_ORYSJ) 32 9.67 2Conserved counterparts:
CNT30524278 Setaria italica VIII:2062998-2063847 (+) coding (0.366)- 63 0 2
CNT30524277 Setaria italica VIII:39441901-39460780 (-) noncoding (-0.026624)- 65 27.71 2
CNT30524276 Setaria italica VIII:38122349-38122731 (-) coding (0.001)- 60 5.12 2
CNT30524275 Setaria italica VIII:40312374-40343318 (+) noncoding (-0.139264)- 71 5.92 3
CNT30524273 Setaria italica VIII:39737482-39738004 (+) noncoding (-0.049152)- 49 3.76 2
CNT30524271 Setaria italica VIII:8253416-8255649 (-) coding (0.137)- 94 10.54 2
CNT30524268 Setaria italica VIII:1492983-1495613 (-) noncoding (-0.028672)- 61 6.7 2
CNT30524267 Setaria italica VIII:21292719-21293241 (+) noncoding (-0.0258048)- 49 9.75 2
CNT30524266 Setaria italica VIII:14399658-14403589 (-) noncoding (-0.106496)7e-24 (sp|A8QW53|OMT3_SORBI) 72 6.24 4
CNT30524263 Setaria italica VIII:1492983-1495613 (-) noncoding (-0.0004096)- 61 21.99 3
CNT30524260 Setaria italica VIII:13694454-13695123 (+) noncoding (-0.0004096)- 85 3.87 2
CNT30524259 Setaria italica VIII:39021058-39021830 (-) coding (0.062)- 91 22.25 2
CNT30524257 Setaria italica VIII:27285771-27286186 (+) coding (0.228)1e-51 (sp|P24825|CHS2_MAIZE) 85 0.5 2Conserved counterparts:
CNT30524253 Setaria italica VIII:23408109-23417189 (-) coding (0.038)- 87 8.25 3
CNT30524252 Setaria italica VIII:8216669-8217283 (-) noncoding (-0.137216)- 33 12.74 2
CNT30524251 Setaria italica VIII:14398629-14403591 (-) noncoding (-0.17449)0.000000000004 (sp|Q29U70|I4OMT_MEDTR) 50 0.78 4
CNT30524249 Setaria italica VIII:2062768-2063846 (+) noncoding (-0.0700416)0.0000007 (sp|Q9FK81|Y5258_ARATH) 97 27.31 2
CNT30524244 Setaria italica VIII:3645611-3646491 (+) coding (0.076)- 88 0.56 2Conserved counterparts:
CNT30524243 Setaria italica VIII:33511188-33518972 (+) coding (0.104)- 96 5.77 2
CNT30524241 Setaria italica VIII:801140-801564 (+) noncoding (-0.0729088)3e-24 (sp|Q43193|NLTP1_SORBI) 79 18.27 2Conserved counterparts:
CNT30524235 Setaria italica VIII:8213057-8213517 (-) noncoding (-0.0892928)- 43 13.03 2
CNT30524234 Setaria italica VIII:8382923-8383548 (-) noncoding (-0.16384)- 56 0.22 2Conserved counterparts:
CNT30524233 Setaria italica VIII:37649165-37650969 (+) noncoding (-0.16384)- 88 22.04 2
CNT30524232 Setaria italica VIII:11933163-11934289 (-) coding (0.359)1e-62 (sp|Q7GCM7|XIP1_ORYSJ) 40 5.93 3Conserved counterparts:
CNT30524230 Setaria italica VIII:28368594-28370566 (+) noncoding (-0.165069)- 66 7.19 2
CNT30524229 Setaria italica VIII:34151316-34152627 (+) noncoding (-0.024576)- 70 5.99 2
CNT30524227 Setaria italica VIII:36440888-36441213 (-) noncoding (-0.0004096)- - 1.81 1
CNT30524226 Setaria italica VIII:39411807-39461715 (-) noncoding (-0.108134)- 66 40.46 3
CNT30524225 Setaria italica VIII:39725558-39739740 (+) noncoding (-0.090112)1e-21 (sp|Q7XA39|RGA4_SOLBU) 99 0.15 2
CNT30524224 Setaria italica VIII:11051692-11051949 (-) noncoding (-0.0004096)- 43 19.95 1
CNT30524223 Setaria italica VIII:40222361-40242271 (+) noncoding (-0.022528)- 73 0.33 2Conserved counterparts:
CNT30524222 Setaria italica VIII:1368783-1374149 (+) noncoding (-0.192102)0.000001 (sp|Q9SD62|Y3471_ARATH) 61 0.91 2
CNT30524220 Setaria italica VIII:4684288-4686949 (-) noncoding (-0.0192512)- - 4.83 3
CNT30524219 Setaria italica VIII:30812546-30812815 (-) noncoding (-0.032768)- 41 0.4 1
CNT30524217 Setaria italica VIII:38980898-38981252 (-) noncoding (-0.0004096)- 45 8.93 1
CNT30524216 Setaria italica VIII:8836134-8836905 (+) coding (0.3)3e-44 (sp|Q9XF89|CB5_ARATH) 62 13.85 2