SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3407 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30508896 Solanum lycopersicum 2:25692262-25693806 (-) noncoding (-0.04096)- 50 15.97 2
CNT30508895 Solanum lycopersicum 2:31575275-31576688 (-) noncoding (-0.0004096)- 89 33.19 2
CNT30508894 Solanum lycopersicum 2:45546942-45547400 (+) noncoding (-0.14336)- 60 4.87 2
CNT30508893 Solanum lycopersicum 2:41070899-41086064 (-) noncoding (-0.0262144)0 (sp|P07370|CB2B_SOLLC) 77 1229.92 3Conserved counterparts:
CNT30508892 Solanum lycopersicum 2:3965130-3969978 (-) noncoding (-0.004096)- 62 187.32 1
CNT30508890 Solanum lycopersicum 2:7799691-7878317 (+) noncoding (-0.02048)- 30 6.03 2
CNT30508889 Solanum lycopersicum 2:43162104-43162594 (-) noncoding (-0.065536)- 53 616.35 2
CNT30508888 Solanum lycopersicum 2:51755622-51756485 (-) noncoding (-0.0176128)- 86 2.34 2
CNT30508887 Solanum lycopersicum 2:51603815-51605134 (-) noncoding (-0.06144)- 38 6.65 2
CNT30508886 Solanum lycopersicum 2:4660605-4663243 (+) noncoding (-0.0008192)- 36 7.59 2
CNT30508885 Solanum lycopersicum 2:6485370-6487220 (+) noncoding (-0.0004096)- 57 1.72 2
CNT30508884 Solanum lycopersicum 2:41141493-41151898 (+) noncoding (-0.0004096)4e-43 (sp|O49725|PUP10_ARATH) 34 4.58 3Conserved counterparts:
CNT30508883 Solanum lycopersicum 2:44935694-44941507 (+) noncoding (-0.0004096)- - 66.06 2Conserved counterparts:
CNT30508881 Solanum lycopersicum 2:51603815-51605297 (-) noncoding (-0.06144)- 99 25.26 1
CNT30508880 Solanum lycopersicum 2:27687463-27696117 (-) noncoding (-0.024576)- 42 10.87 4
CNT30508879 Solanum lycopersicum 2:32804742-32819223 (+) noncoding (-0.02048)- 61 12.94 2
CNT30508878 Solanum lycopersicum 2:50393091-50393666 (-) noncoding (-0.045056)0.000006 (sp|Q8LSZ4|E2FE_ARATH) - 12.58 2
CNT30508877 Solanum lycopersicum 2:55455105-55466205 (-) noncoding (-0.0323584)- 71 3.39 2
CNT30508876 Solanum lycopersicum 2:18587002-18598907 (+) noncoding (-0.065536)- - 5.17 3
CNT30508875 Solanum lycopersicum 2:29659087-29660814 (+) noncoding (-0.094208)- 33 13.08 3
CNT30508874 Solanum lycopersicum 2:29866862-29867967 (+) noncoding (-0.0192512)- 53 5 1
CNT30508872 Solanum lycopersicum 2:35538016-35544085 (+) noncoding (-0.0004096)- 61 1.52 2
CNT30508870 Solanum lycopersicum 2:24243420-24243795 (-) noncoding (-0.08192)- 57 2.72 1
CNT30508869 Solanum lycopersicum 2:34412344-34412836 (+) noncoding (-0.0004096)- 31 0.42 2
CNT30508868 Solanum lycopersicum 2:3417974-3421510 (-) noncoding (-0.0004096)- 31 3.21 2
CNT30508867 Solanum lycopersicum 2:28837377-28846411 (-) noncoding (-0.049152)- 92 9.89 3
CNT30508866 Solanum lycopersicum 2:27684812-27685305 (+) noncoding (-0.0004096)- 74 14.9 2
CNT30508865 Solanum lycopersicum 2:51654471-51655126 (+) coding (0.07)- 89 17.45 3
CNT30508864 Solanum lycopersicum 2:24747410-24750997 (-) noncoding (-0.0208896)- 79 3.64 4
CNT30508863 Solanum lycopersicum 2:33466887-33467971 (-) noncoding (-0.0004096)- 39 35.95 1
CNT30508862 Solanum lycopersicum 2:31802879-31809672 (-) noncoding (-0.139674)- 35 6.41 3
CNT30508861 Solanum lycopersicum 2:20665542-20668643 (+) noncoding (-0.0004096)- 31 6.38 2
CNT30508860 Solanum lycopersicum 2:25806460-25806910 (+) noncoding (-0.0004096)- - 0 2
CNT30508859 Solanum lycopersicum 2:45303582-45304275 (-) noncoding (-0.0004096)7e-33 (sp|Q2LGZ2|ATPG_VIGUN) 38 983 2
CNT30508858 Solanum lycopersicum 2:22663768-22687092 (+) noncoding (-0.0004096)- 46 15.99 3
CNT30508857 Solanum lycopersicum 2:27639153-27639757 (+) noncoding (-0.077824)- 51 16.36 2Conserved counterparts:
CNT30508856 Solanum lycopersicum 2:28837401-28846479 (-) noncoding (-0.0004096)- 69 29.1 2
CNT30508855 Solanum lycopersicum 2:4805287-4818432 (+) noncoding (-0.045056)- 76 6.28 5
CNT30508854 Solanum lycopersicum 2:36993424-36995662 (+) noncoding (-0.073728)- - 18.58 3
CNT30508853 Solanum lycopersicum 2:28837401-28838926 (-) noncoding (-0.0004096)- 42 31.35 2
CNT30508851 Solanum lycopersicum 2:35234727-35235324 (-) noncoding (-0.0323584)- 63 5.21 1
CNT30508850 Solanum lycopersicum 2:35417211-35422572 (+) noncoding (-0.0004096)- 83 24.26 2
CNT30508849 Solanum lycopersicum 2:41234310-41235833 (+) noncoding (-0.0004096)- 47 0.32 2
CNT30508848 Solanum lycopersicum 2:44782912-44783187 (-) noncoding (-0.065536)- 38 0.26 2
CNT30508847 Solanum lycopersicum 2:22663768-22687092 (+) noncoding (-0.0004096)- - 11.25 3
CNT30508846 Solanum lycopersicum 2:35770956-35771488 (-) noncoding (-0.04096)3e-43 (sp|P07398|RBS3_WHEAT) 57 3411.17 2Conserved counterparts:
CNT30508845 Solanum lycopersicum 2:44613537-44614805 (+) noncoding (-0.0282624)- 31 3.66 1
CNT30508844 Solanum lycopersicum 2:40669046-40673681 (-) noncoding (-0.0352256)9e-86 (sp|P46300|RS4_SOLTU) 39 85.38 2
CNT30508843 Solanum lycopersicum 2:40673153-40680075 (-) noncoding (-0.1024)- 30 0.11 2
CNT30508842 Solanum lycopersicum 2:39681664-39681964 (+) noncoding (-0.0004096)- 43 8.68 2