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Detailed information on CNT3091201


BLAST search results

BLAST vs Swiss-Prot:
sp|P27493|CB22_TOBAC, E-value = 2e-159

BLAST vs NONCODE:
NONSTUT001352, E-value = 8e-124

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534338Solanum tuberosumEucalyptus grandis62.1354.7585.41617forward
CNT30709059Solanum tuberosumGlycine max43.8180.5687.13435forward
CNT30173250Solanum tuberosumTrifolium pratense56.3948.5784.29560forward
CNT30313626Solanum tuberosumCamelina sativa64.7555.7781.65643forward

Expression of CNT3091201

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MDQAWVAQVVKSTLAEDLGSGLEPHSLTELDTITGQ*

>peptide 2 (67 aa)
MPLGLQQGLMGQSCHQGRVGRQPHQEVHQQYGNLQRLPSRQLGKPRWPRCSVHGPSLGCPSSQVHPR*

Sequence

>CNT3091201
CAAACAATGAAATTTATGGAATGTTTGCTGATATTCATTTTCCGGGAACAAAGTTTGTGGCGTAGGCCCAGGCATTGTTGTTGACTGGATCTGCAAGGTG
GTCAGCAAGGTTCTCCAATGGACCCTTTCCGGTAACAATGGCCTGAACGAAGAATCCAAACATAGAGAACATAGCAAGTCTGCCGTTCTTAATCTCCTTT
ACTTTGAGCTCAGCAAATGCCTCTGGGTCTTCAGCAAGGCCTAATGGGTCAAAGCTGCCACCAGGGTAGAGTGGGTCGACAACCTCACCAAGAGGTCCAC
CAGCAATACGGTAACCTTCAACGGCTCCCATCAAGACAACTTGGCAAGCCCAGATGGCCAAGATGCTCTGTGCATGGACCAAGCTTGGGTTGCCCAAGTA
GTCAAGTCCACCCTCGCTGAAGATCTGGGATCCGGCCTTGAACCACACAGCCTCACCGAACTTGACACCATTACGGGCCAATAGCTCAGGGAAGACACAT
CCAAGAGCACCAAGCATAGCCCATCTGCAGTGGATCACCTCAAGTTCACGGTTCTTGGCAAAGGTCTCAGGGTCTGCTGAAAGTCCAGCGGTATCCCATC
CATAGTCACCAGGGAATTCGCCAGTCAAGTAGCTTGGGGACTCACCAGAGAATGGGCCCAAGTACTTAACACGGTCCGTAGTCACCAGGGAATTCACCGG
TCAAGTAGCTTGGGGACTCACCAGAGAATGGGCCCAAGTACTTAACACGGTCAGGGCCATACCATGGGCTGCTAGATGGGGCAGACTTGGCGACAGCCTT
TCTCATAGTGATCCTTCCATTTCCAGTGATTTCTGAGGCAGAGGGTGAGAGTTTCACTGCCTGTCCAGCAAAAGAAGGGGAAGAAAGAGCCATTGTAGCA
GCTGCCATGGTTTATAAAGAGAGGAAAGTGAGGGGGTTGCTAGTTTGATATGTAAAAGTTAGTTGTGATGAGCTGAAGTTATTGAAACTTCAC