CANTATAdb - search

Detailed information on CNT30709062

BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 1e-126

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30380511	Glycine max	Manihot esculenta	39.7	45.45	84.69	320	forward
CNT30543163	Glycine max	Brassica napus	38.21	63.64	84.74	308	forward
CNT30217700	Glycine max	Kalanchoe fedtschenkoi	48.26	49.3	83.03	389	forward
CNT30621216	Glycine max	Cajanus cajan	56.82	60.03	89.08	458	forward
CNT30705055	Glycine max	Prunus avium	45.41	57.91	85.25	366	forward

Expression of CNT30709062

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLTCRGRSCSFTLSSAKASGSSARPNGGPPAIR*

>peptide 2 (38 aa)
MLTLPTSGADGPSFTALPAKDGEERAMEEAAAIFKTLG*

>peptide 3 (29 aa)
MAHLEWITSSSRFLAKVSGSAESPAVSQP*

Sequence

>CNT30709062
GTTTTCGTAAAAAGCAAGTAACATTAAGTTGGATTCGGATACACAAGATAATTCACATTATCTGAAGTACATTGCAATAACATATACTTCACCAAACACA
AATCTAAAAACTCTCAAAAGTCCACAAGTCATCCTTTTCTTTCATGCTCACTTGCCGGGGACGAAGTTGTTCCTTCACCTTAAGCTCAGCAAAAGCCTCT
GGGTCATCAGCAAGGCCCAATGGGGGCCCACCAGCAATACGATAACCCTCAACAGCACCCATTAGGATAACTTGGGTGGCCCAGATGGCGAGGATGCTCT
GGGCGTGGACAAGGCTTGGGTTGCCCAAGTAGTCCAGCCCACCCTCGCTGAAGATCTGGGACCCGGCCTTGAACCACACAGCTTCTCCAAACTTGACCCC
GTTGCGGGACAATAGTTCGGGGAAGACGCAGCCCAAGGCCCCGAGCATGGCCCACCTGGAGTGGATCACTTCGAGCTCACGGTTTCTGGCGAAGGTTTCT
GGGTCGGCCGAAAGCCCAGCAGTGTCCCAGCCGTAGTCACCTGGGAACTCGCCAGTGAGGTAGGACGGGGGCTCGCCAGAGAATGGGCCCAAGTACTTGA
CGCGGTCTGGGCCGTACCATGGGCTTCCGGAGGAGGCCTGCTTGGTGACGGTCTTCCTCATGCTGACCCTCCCGACTTCGGGGGCTGATGGGCCCAGCTT
CACGGCCTTGCCAGCCAAGGATGGGGAAGAGAGAGCCATGGAGGAGGCTGCTGCCATTTTTAAAACTCTAGGATGAGCTTGCTTTCTGCCTTGTGTTATG
GAGTTG