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Detailed information on CNT3091655


BLAST search results

BLAST vs Swiss-Prot:
sp|P07398|RBS3_WHEAT, E-value = 1e-36

BLAST vs NONCODE:
NONCQUT001608, E-value = 1e-38

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317063Solanum tuberosumCorylus avellana30.5832.0181.08185forward
CNT30727202Solanum tuberosumCorchorus capsularis30.5810.6982.7185forward
CNT30508838Solanum tuberosumSolanum lycopersicum44.6336.0594.44270forward
CNT30620550Solanum tuberosumCajanus cajan30.2515.2883.06183forward
CNT30355748Solanum tuberosumLactuca sativa30.0836.9982.97182forward
CNT30573704Solanum tuberosumVitis vinifera30.5823.6981.62185forward
CNT30705707Solanum tuberosumPrunus avium30.5816.4283.78185forward
CNT30176139Solanum tuberosumVigna angularis33.0614.8882.5200forward
CNT3039544Solanum tuberosumMarchantia polymorpha9.9222.5691.6760forward

Expression of CNT3091655

Peptides detected in this lncRNA

>peptide 1 (31 aa)
SHNLVGIEENTPVQNAKNMSIGVINYRFDEI*

Sequence

>CNT3091655
TTCTCATAACTTGGTCGGAATCGAGGAAAATACACCGGTACAAAACGCAAAAAACATGTCGATAGGAGTAATTAATTATAGGTTTGATGAAATTTAGTAT
CCTTCTGGCTTGTAGGCAATGAAACTGATGCACTGCACTTGACGAACGTTGTCGAATCCGATAATACGGATCCAGGCCTGTGGGTACGCATTCTTGGCCT
CTTGAACCTCAGCCAACACCTGGGTTGCGTCAGTGCACCCAAACATAGGCAACTTCCACATGGTCCAGTATCTACCATCGTAGTATCCTGGAGATATTGA
CCTCAGTCTCGAATTCCAAGCAAGGAACCCATCCATTTTTCAAAAGGTACTCAACTTCCTTGAGCAATTGCTCATCGGACAAGTCAGGAAGGGAAGTAAT
GTCAACGTTGTTGTTCTTCTTAGTAACGGGGAAAGACGCGGCGGATTTGAGTCCGGTGAAGGGTGCGACCATGCTAGCTTGAGCAACATTGCTACGGGTA
GCAACGGCTGCTGAGGAGACAATTGAGGAAGCCATTACGTTACTACTTAGCTATAAAACGTTTTTTTTTTTTTTACTTCAAAGAAACTTGTTTTTTTTTT
AAGAT