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Detailed information on CNT3095396


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43189|LOX13_SOLTU, E-value = 4e-139

BLAST vs NONCODE:
NONCSAT002150, E-value = 1e-16

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30382118Solanum tuberosumManihot esculenta8.2220.2284.03144forward
CNT30709447Solanum tuberosumGlycine max4.6822.9185.3782forward
CNT30569104Solanum tuberosumActinidia chinensis3.7125.6986.1565forward
CNT30508605Solanum tuberosumSolanum lycopersicum10.6280.1784.41186forward
CNT3025614Solanum tuberosumPopulus trichocarpa5.4325.5484.2195forward

Expression of CNT3095396

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MNTRVIHRNISFGQLPDRALNTLITWSIHFASNTKLISIWMWQTQFNC*

>peptide 2 (64 aa)
MLRDLACFLEEIPCKLNKKQSINTLYLQEDYIDYRQSKVTRDNFLIVKKPTYLKSPNYDRINSS*

>peptide 3 (29 aa)
MMVQYEKFIIVHRLSNNMLKSLFSTCNDS*

>peptide 4 (40 aa)
MIGLTPASISLANSSSVLHAVLLSAQSILKSYKHIKVSDH*

Sequence

>CNT3095396
TTGTAAACCACAGCTGACATTTCCATGGCAAATTTGGATTGAAAAACTGTACTCTCAAGAACTCCACCAGCATTGACTAGGATTTGTCTTGCCGAAGCAT
TAATATTCATTGTGTCCCGGAAATGAGGATATAGAAGCTTATGAATAGGGTGAAGCACACTTAGTTGCCTGTTTGTTGCAATCACAAATGGCTCGATCAC
TGCATGAGTATTCAACCTGCGAAGATGATCAAACATTTAGATTAATCGTACAAAGCATGTGTTGAATTAGTCATTATTAAGGACATCACGATGCACTAAA
GCTCCCACTATATGCAGGTCTGAAGAAGGGTCGAACCACAAGGATCTATTGTACACAGCCTTATGAACTCATAGCAACTTTACCAGTATCTTCAAGGCTC
CCCTTCGAGTTAGTTATTATTGTGTATCATGAATCACTATAGAAGTCGTATGACATAAAGGGAATTACCAATGACTAATTAGTTGATGAACACCAGAGTC
ATTCACCGCAACATAAGCTTTGGCCAATTGCCAGATAGAGCTCTCAACACCTTGATCACTTGGAGTATACACTTTGCTAGTAACACCAAATTGATCTCCA
TCTGGATGTGGCAAACTCAATTCAATTGCTAGTGGCTTCAAAGATCCATTATCTTGCAAGAAGAGCAAAGTTCTCGAGGCATATGTTTTCGTTATTGTAG
TGTTTATCCTCCTCAAATATGGTATAATTACATCATGATGGTTCAATATGAAAAGTTTATTATTGTTCATCGCCTGTCAAATAACATGTTAAAATCCTTA
TTTAGTACTTGTAACGATTCGTAATCATACAAACTAGTGTGGAATTTCGAGTAAATACATTACCTCATCAACCGTTAGTCCATCCAGCTTATCCTCTATG
TGTTCTGCAGTAATTGTACTGTTTTGATTTCCATATGCTTCGGGATCTAGCTTGCTTTTTGGAGGAAATTCCTTGCAAATTAAACAAGAAACAAAGCATC
AATACTCTTTATCTACAAGAAGACTATATAGATTATAGACAATCAAAAGTAACTCGAGACAATTTCCTAATTGTGAAGAAACCAACTTACTTGAAGTCTC
CTAATTATGATAGGATTAACTCCAGCTAGCATTTCTCTTGCGAATTCTTCATCAGTCCTCCACGCGGTTTTACTATCTGCACAATCAATACTTAAATCAT
ACAAACACATAAAAGTGAGTGATCATTAGCTAGATTACTTCTTATGATGTAACAAATTGTACCTTTAATCACTAGAGGAGTTGGAAATCTCAATATTCCT
TCACCGTCTGTTCGAAGGAGTTCTTTTATCATCTCCAGAGGTATAGCAGCAGTGAGAGCCTTAAATAAAGGTCCTTGAGGAAGTTTGATCCCTCCTTCAT
ATAGTCTAAGTACATCCTCAAAACTATCGAACTCGTTAGGGGTACCATCAAACAGGGCATGTAATTCAGGGAGGATGAATTGAACAATGGATTTCAAAGC
ATATGTTAGGAAGTCTGACATCTTCAAGTGACCAAAACGCTCGTCTCTCGGTACATAGATGTCTAAGCTCAGAATAAGAGGAATCCTGGGTACCATCAAA
CAGGGCATGTAATTCAGGGAGGATGAATTGAACAATGGATTTCAAAGCATATGTTAGGAAGTCTGACATCTTCAAGTGACCAAAACGCTCATCTCTCGGT
ACATAGATGTCTAAGCTCAGAATAAGTGGTATCCTGCTTTCACTTTTAGGA