Detailed information on CNT30382118


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3095396Manihot esculentaSolanum tuberosum20.228.2284.03144forward

Expression of CNT30382118

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MARSLHGCATYEENFIPVADKLVNARINYSHICFSQLPYGTFNAMLSWCAYFANGTEFISLRMRQA*

>peptide 2 (33 aa)
MIKREIKERESPAESLQLTELTSCRETPWPNNS*

>peptide 3 (30 aa)
MPICCNHKWLDRCMGVQPMKKISYQWLISW*

>peptide 4 (39 aa)
MPESITATYALASCHMEPSMPCSAGVHTLLMAPSLSPSG*

>peptide 5 (38 aa)
MDVISMAYFAGNTVNSNNPPALISVCLATAFMFIVSRK*

Sequence

>CNT30382118
GATTAATTTACCTCTTAATTAGATCCTGAGGGAGTGCTTGCTCAGTGAAATTCCAGCTTTTGTAAGCCATGGATGTCATTTCCATGGCATACTTTGCCGG
AAATACTGTAAACTCCAACAATCCACCAGCATTAATTAGTGTTTGTCTAGCCACTGCATTTATGTTCATTGTGTCCCGGAAGTGAGGTTGCAGAAGTTTG
TATATTGGATGAAGCACACTTAGATGCCTATTTGTTGCAATCACAAATGGCTCGATCGCTGCATGGGTGTGCAACCTATGAAGAAAATTTCATACCAGTG
GCTGATAAGCTGGTGAATGCCAGAATCAATTACAGCCACATATGCTTTAGCCAGTTGCCATATGGAACCTTCAATGCCATGCTCAGCTGGTGTGCATACT
TTGCTAATGGCACCGAGTTTATCTCCCTCAGGATGAGGCAAGCTTAATTCGATCGCAAGAGGCTTAAGAGTACCATCATCTTTCAAGAAAAGTAGGGTCC
TGGTTGCATATGTCTTTGTGGAAGTAGCATTTATCCGCCTCAGCTACATCGATCACTGCCAAGGTGATCAATACTGGCTAGCAAAGAAAGAAGAATAATC
AAAGAATCATGATAAAGAGAGAAATTAAAGAAAGAGAATCACCTGCTGAGTCACTGCAGTTGACAGAACTAACGAGTTGCAGAGAAACTCCATGGCCAAA
CAACTCATGAAC