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Detailed information on CNT3091167


BLAST search results

BLAST vs Swiss-Prot:
sp|P07370|CB2B_SOLLC, E-value = 8e-179

BLAST vs NONCODE:
NONSTUT001352, E-value = 3e-170

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30702989Solanum tuberosumQuercus lobata52.3168.6981.25656forward
CNT30404043Solanum tuberosumBeta vulgaris41.8747.683.81525forward
CNT30525395Solanum tuberosumPhaseolus vulgaris52.3164.3883.69656forward
CNT30623258Solanum tuberosumDaucus carota52.3966.6385.54657forward

Expression of CNT3091167

Peptides detected in this lncRNA

>peptide 1 (50 aa)
CQVAHYIFTRSSNDQKLENVLIFLFSGDKVCGVGPCVVVDWVCKVISKVL*

>peptide 2 (39 aa)
LSGSTLHLYTVIKRPETRECFNIFIFRGQSLWRRTMRCC*

>peptide 3 (68 aa)
MDQAWVTQVVKSTFTEDLRSSLEPHSLTKLDTVTGQELREDTSKSTKHSPSTVDHLKFTVLGKSFRVC*

>peptide 4 (67 aa)
MLLDHQQDLMGQNCHQGRVGRRPHQEVHLQYGIPQQLPLTQLGKPRWPRCSVHGPSLGYPSSQVHLH*

Sequence

>CNT3091167
ATTGTCAGGTAGCACACTACATCTTTACACGGTCATCAAACGACCAGAAACTAGAGAATGTTTTAATATTTTTATTTTCCGGGGACAAAGTTTGTGGCGT
AGGACCATGCGTTGTTGTTGACTGGGTCTGCAAGGTGATCAGCAAGGTTCTCTAATGGTCCCTTTCCAGTAACAATGGCTTGAACAAAAAATCCAAACAT
AGAGAACATAGCAAGTCTACCATTCTTAATCTCCTTTACTTTGAGCTCAGCAAATGCTTCTGGATCATCAGCAAGACCTAATGGGTCAAAACTGCCACCA
GGGTAGAGTGGGTCGACGACCTCACCAAGAGGTCCACCTGCAATACGGTATCCCTCAACAGCTCCCATTAACACAACTTGGCAAGCCCAGATGGCCAAGA
TGCTCTGTGCATGGACCAAGCTTGGGTTACCCAAGTAGTCAAGTCCACCTTCACTGAAGATCTGAGATCCAGCCTTGAACCACACAGCCTCACCAAACTT
GACACCGTTACGGGCCAAGAGCTCAGGGAAGACACATCCAAGAGCACCAAGCATAGCCCATCTACAGTGGATCACCTCAAGTTCACGGTTCTTGGCAAAA
GTTTCAGGGTCTGCTGAAAGTCCAGCAGTATCCCAGCCGTAGTCACCAGGGAATTCACCGGTCAAGTAGCTTGGGGACTCACCAGAGAATGGGCCTAAGT
ACTTAACACGGTCTGGGCCATACCATGGGCTGCTAGATGGGGCAGACTTGGCGACAGCCTTTCTCATAGTGATCCTTCCATTTCCAGAAATTTCTGAGGC
AGATGGTGAAAGTTTCACTGCCTGTCCAGCAAAAGAAGGGGAAGAAAGAGCCATTGTAGCAGCTGCCATGATTTAGATTAAGAGAAAAGTGTTGATAGCT
TGGGGACTCACCAGAGAATGGGCCCAAGTACTTAACACGGTCCGTAGTCACCAGGGAATTCACCGGTCAAGTAGCTTGGGGACTCACCAGAGAATGGGCC
CAAGTACTTAACACGGTCAGGGCCATACCATGGGCTGCTAGATGGGGCAGACTTGGCGACAGCCTTTCTCATAGTGATCCTTCCATTTCCAGTGATTTCT
GAGGCAGAGGGTGAGAGTTTCACTGCCTGTCCAGCAAAAGAAGGGGAAGAAAGAGCCATTGTAGCAGCTGCCATGGTTTATAAAGAGAGGAAAGTGAGGG
GGTTGCTAGTTTGATATGTAAAAGTTAGTTGTGATGAGCTGAAGTTATTGAAAC