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Detailed information on CNT3081668


BLAST search results

BLAST vs Swiss-Prot:
sp|P92534|M1000_ARATH, E-value = 7e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30401117Brassica junceaTriticum turgidum30.7621.8191.23171forward
CNT30681383Brassica junceaTriticum urartu30.7619.3791.23171forward
CNT30480888Brassica junceaArabidopsis halleri42.4526.43100236forward

Expression of CNT3081668

Peptides detected in this lncRNA

>peptide 1 (40 aa)
FSTMTNQLIKRRHYSLSFLFPPPFFALSLYSRSEAPLFHS*

>peptide 2 (34 aa)
MDQNPNKSILLGGTAQGKKKDRNHIRRPTIFLGR*

Sequence

>CNT3081668
TCTTCTCTACCATGACGAATCAATTGATTAAACGTAGGCATTATTCTCTTTCCTTTCTTTTCCCCCCCCCATTTTTTGCCCTATCACTTTACTCCCGATC
CGAAGCACCCCTTTTCCATTCATAGAGAAATCCAATCGTCAAAATAAATAAAAAGGCCATCATGGACCAAAATCCAAACAAATCAATCTTGTTGGGAGGT
ACTGCCCAAGGAAAGAAAAAGGATCGAAACCACATTCGTAGGCCGACAATTTTTCTGGGTAGGTAGAACTATTGGAAGCAAATGGAAAAGGAACACCGAG
TAGGATCAAAGAAACTAGCAGACTAATCACTAAATAGATAGAAATTGGTGCAAATTCTGACATCATTACAGCCCACTTTGTTTTCTCGCTCCTTGCTGGC
GAAGAAGCGGCATATCGAAAAATAAAGAAAGAAGCAAAAGCCCATCCCGAAAGGTAGCTTGCTTACTTATGCGATAGAGTCCCCCCCAGGGCCGCCTTTC
TTGAGGAACACTCTATTTTTGAGTTCCTTAAATTCTGGGGCCTCTTTACCGCGCTC