Detailed information on CNT30726085


BLAST search results

BLAST vs Swiss-Prot:
sp|P49118|BIP_SOLLC, E-value = 3e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727335Lupinus angustifoliusCorchorus capsularis58.0829.8982.47194forward
CNT3086211Lupinus angustifoliusVigna radiata24.5512.6787.882forward
CNT30239820Lupinus angustifoliusAvena sativa31.4441.0284.76105forward
CNT30613247Lupinus angustifoliusArabis alpina38.6242.4382.95129forward
CNT30569910Lupinus angustifoliusVitis vinifera33.8327.5691.15113forward
CNT30704517Lupinus angustifoliusPrunus avium51.529.181.98172forward

Expression of CNT30726085

Peptides detected in this lncRNA

>peptide 1 (97 aa)
STSLSLSSYSSFSALWLSSNHSNASFTAPRFSPSHLIPTCQRAYLCHQSGFSGCRCKFQVRYVHQSSPSPSYLPRQTLLLHEPCAQFPPGSGVPFHL*

>peptide 2 (54 aa)
FNLFEPLFIFFFLCTLVVIQPFQCFFHGTSIFSFSSDSNLSASLSLSPIWFFRL*

Sequence

>CNT30726085
CTTCAACCTCTTTGAGCCTCTCTTCATATTCTTCTTTCTCTGCACTCTGGTTGTCATCCAACCATTCCAATGCTTCTTTCACGGCACCTCGATTTTCTCC
TTCTCATCTGATTCCAACTTGTCAGCGAGCTTATCTTTGTCACCAATCTGGTTTTTCAGGTTGTAGATGTAAGTTTCAAGTGCGTTACGTGCATCAATCC
TCTCCTTCACCTTCTTATCTTCCTCGGCAAACTCTTCTGCTTCACGAACCATGCGCTCAATTTCCTCCTGGCTCAGGCGTCCCTTTTCATTTGTGATGGT
GATCTTTTCTGCTTTACCTGTGCCCTTGTCTTCT