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Detailed information on CNT30726058


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJY5|PUMP5_ARATH, E-value = 3e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728471Lupinus angustifoliusCorchorus capsularis28.1818.5880.07281forward
CNT30379202Lupinus angustifoliusManihot esculenta28.1822.0978.65281forward
CNT30173347Lupinus angustifoliusTrifolium pratense23.7733.3881.01237forward
CNT30654380Lupinus angustifoliusRosa chinensis24.072083.33240forward

Expression of CNT30726058

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MFITLVLITSTGLVTTAATNPAAKLAVTCVPSPSRNNPFSNIISLNWS*

>peptide 2 (76 aa)
MNRVRVGFTLKLHTNLNKVKRVSGTSSNDGSDASFSKTFETHNRSCNKVINFERMNRIEGNRNFGLLEKKGLVNVG*

>peptide 3 (29 aa)
MDNKTQGCFSFITINIRKNTKARNLLYGK*

Sequence

>CNT30726058
TTTCGGAAATGGAATGAACTTCTCTTATTCAAGTAGATAATGGATAACAAAACACAAGGTTGCTTCTCATTCATAACGATAAATATAAGGAAAAATACGA
AAGCAAGAAATCTTCTTTATGGAAAATGAAAGATCTTCGTCATCATCTTAGAAATCCTTTAACAGCTTGCGAACTTGTTCCAGAGTCACAAACAGCACAA
CAGTGAAGGGTCCCTGCCTCGAAATCGTAGGAATAAATCCTTTGTAAAGGGCCATAGGACCTTCAGCACGCACAGTCTTCAAAGCACAATCCATAGCACC
AGAATACGGTGGCTCCGCCCCAGGCTCCACCCTCATGTTCATAACCCTAGTCTTGATCACATCCACCGGGTTGGTCACCACCGCCGCCACGAACCCCGCC
GCAAAACTAGCTGTAACATGTGTCCCAAGCCCATCACGCAACAACCCCTTTTCCAATATCATCTCCTTAAACTGGTCGTAAGACGCCAACTGTGACACGT
GGATCGAAGAACCGTTCTGAAATGCAAGTGCCGGTCGAAGATTATGAACCGGGTTCGGGTTGGGTTCACCCTGAAGCTGCATACGAACCTTAATAAGGTC
AAGAGGGTGAGTGGAACATCCAGCAATGATGGAAGCGATGCCTCCTTCAGCAAAACCTTTGAGACCCATAATAGATCTTGCAATAAAGTTATAAACTTTG
AAAGAATGAATAGAATTGAAGGTAATAGAAATTTTGGTTTGTTAGAGAAGAAAGGGTTAGTTAATGTAGGTTAATGAAAAAAGATAGAAGAGGACCAGTT
GGAATTAGAGGTCATTTCACTTGAGACCAAGAGATGGGAATGAAGGCCACAAGCTATGGAAGAAGAGTGGGGAACAGTAGCCCTCTGAGACATAGGCTAG
TAGCCGAAAGCAATGAATGAGGAAGAGTTATTTGGTGTGGGAAGAAAGAAGATTGGGGAGAGGATTTTATAGCAATGTCATTAGAAGCTGTGCTTGT