Detailed information on CNT30712567


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FY14|TIP1_MEDTR, E-value = 2e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678075Glycine maxSetaria viridis21.6915.0188.3177forward
CNT30522256Glycine maxSetaria italica2015.1787.3271forward
CNT30579352Glycine maxEchinochloa crusgalli21.9711.2187.1878forward

Expression of CNT30712567

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MPRRKVMLPPTKAPKRANAWAMEAMPEPEPANTKMKVEMNSAKAAFNVSG*

Sequence

>CNT30712567
AATAACGGTCTTACGGAGGCGGTGACGAAGGCCAGGAGGAGGGAGGCGACGATGGAGCCGAGGAGCTGGGCGATGACGTAGACGATGCCGCGGAGGAAGG
TGATGTTGCCGCCGACGAAGGCGCCGAAGAGGGCGAATGCATGGGCGATGGAGGCGATGCCGGAGCCTGAGCCGGCGAACACGAAGATGAAGGTTGAGAT
GAACTCAGCCAAAGCCGCCTTCAACGTGTCGGGGTGAGTCGCCTCTTCAGGCCTTCCGACGGCGATGTTTCTGATCGGCATCTTCTTCAATTGACGCTGA
CGATTATGATGAGATCAAGTGAACACCGATCACTCACTGAAATCACTCTCTGTTT