Detailed information on CNT30712213


BLAST search results

BLAST vs Swiss-Prot:
sp|P16059|PSBP_PEA, E-value = 2e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3088598Glycine maxVigna radiata58.7830.3295.83144forward
CNT30510234Glycine maxSolanum lycopersicum43.2717.2189.62106forward
CNT30554351Glycine maxOryza glaberrima36.3313.383.1589forward

Expression of CNT30712213

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MYSLPSFTVAVISWCLPPSSPSAVLVNTVKL*

>peptide 2 (40 aa)
QNSTPLIKFLGNTERTCCALHKSSCSLKPPLVSSLSLANV*

Sequence

>CNT30712213
TGCAGAATAGCACTCCACTAATTAAGTTCTTAGGCAACACTGAAAGAACTTGCTGTGCTCTCCACAAATCTTCTTGCTCCCTTAAACCACCTCTTGTCTC
CAGCTTGAGCCTTGCAAATGTATAGTTTGCCATCTTTCACTGTTGCTGTAATCAGCTGGTGCTTGCCACCTTCATCTCCATCAGCTGTCCTTGTCAACAC
AGTCAAACTGTAGTACTGAACTCCTCAGGTGAACCATAGTCAGTG