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Detailed information on CNT30710434


BLAST search results

BLAST vs Swiss-Prot:
sp|P12853|PSBO_CHLRE, E-value = 1e-52

BLAST vs NONCODE:
NONGMAT000837, E-value = 2e-59

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675396Glycine maxSetaria viridis8.2224.384.6278forward
CNT30571093Glycine maxVitis vinifera13.731.186.92130forward
CNT3023343Glycine maxPopulus trichocarpa27.9235.7185.66265forward

Expression of CNT30710434

Peptides detected in this lncRNA

>peptide 1 (43 aa)
VGRSETEKVSWTFLILSIIIEVNIIYTRDNALSASPTGGVTRK*

Sequence

>CNT30710434
GTTGGCAGAAGTGAAACTGAAAAGGTAAGTTGGACATTTTTAATTTTAAGCATTATAATCGAAGTCAATATAATATACACACGTGATAACGCTCTGAGTG
CTTCGCCAACTGGGGGAGTTACAAGAAAGTAGAAATACAGCATTAAGAAAAAGGGTCTATGAGAGCTTTAGCCCCCAAATCAGTATCAGAAGGCTGAACA
CTCTCGAAGACCCCAATAACCTCACCAGTCTCAGGCTTGGTCTTGGTGACACTCAAGGTGATTTTGCCCTTGGAAGAAGAAGCACTCTTGTTGTTTTCTT
TAGCAAGTTCCTCTTCATCTCCTCTGCCACCAGCAGGCAAAGCAACAGCATTGTCATAACCAGTTGAGGCACCCCTTCCCTTGGGGTCCAAGAAAGAGGA
ACCACGGTAAGAAGGCACTAGGAACTCCCCACTGAAGCTGTCTGGTTTCCCAGATGCCACCAACTGCTTAATGGTAAAGAGGAATGGCACACGCTCTCCC
CCGGGAAGCTGAACAGTGACAGCAGCATAGTCAATTCCGTCTTTCTCCTCGAATTTCACGGTTCCATCGGATGTAACCTCGAAGGGACCCTCAATCTCGT
TAGCCTTTTTGGAACACCTTCTGCACTTGCTCCCTGAATATATACAACACCAATCACTTGTGCTATTCTTAAATAACAACTATTTTTGTGTCTATTTCTC
TCCCATTTACTTGTATAATCTATTGCACAACATTCTCACTTAGTCATGCATGATGCCACCCAGTTAAATTAAGATGTAGTATCAATTTTAATAAATAAAT
TGCCCACTCAACAAGCATCACAATATATTATTAGATGAACTAGCAAGTTAAGACATCTCAATTTTAATAAGTAAATTAGTTACCGATATTTAAAATTAAG
ATTGTGTAGTTTATAGAAGCCGCAGTTTGTTATATGATTTCAGAATAAT