Detailed information on CNT30709285


BLAST search results

BLAST vs Swiss-Prot:
sp|P30707|RL9_PEA, E-value = 9e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696028Glycine maxOryza sativa24.8221.1286.7668forward
CNT30674118Glycine maxSetaria viridis39.0531.9484.11107forward
CNT30521748Glycine maxSetaria italica39.4210.7284.26108forward
CNT30631246Glycine maxVigna unguiculata74.8239.587.32205forward
CNT30226637Glycine maxHordeum vulgare39.0544.9683.18107forward
CNT30555011Glycine maxOryza glaberrima39.0529.3283.18107forward
CNT30438384Glycine maxAegilops tauschii39.0519.8182.24107forward
CNT3059704Glycine maxArabidopsis lyrata52.1929.7981.82143forward
CNT30142046Glycine maxLolium perenne39.0528.6983.18107forward
CNT30348128Glycine maxEragrostis tef39.0513.2983.18107forward
CNT30596823Glycine maxOryza meridionalis24.8227.8786.7668forward
CNT30103407Glycine maxOryza rufipogon24.8219.8386.7668forward
CNT30583248Glycine maxEchinochloa crusgalli24.8213.8589.7168forward

Expression of CNT30709285

Peptides detected in this lncRNA

>peptide 1 (90 aa)
LLAEEISDLDGLAVVANASVDRKMSVHESHFVSVSLGDAGDQILNVAEGGADGGGGFTRTKPRINLELPFTAIVGNKALNLDNLSVNLDAH

>peptide 2 (34 aa)
MAAEVLREPNQESILSFLLPPSSVIRPSTSITLA*

Sequence

>CNT30709285
CTTCTCGCCGAGGAAATTTCTGATCTCGATGGACTTGCTGTTGTTGCCAATGCTAGCGTTGATCGGAAAATGAGCGTACACGAATCTCATTTTGTATCGG
TATCCCTTGGTGACGCCGGTGATCAAATTCTCAACGTGGCTGAGGGCGGTGCGGATGGCGGCGGAGGTTTTACGAGAACCAAACCAAGAATCAATCTTGA
GCTTCCTTTTACCGCCATCGTCGGTAATAAGGCCCTCAACCTCGATAACCTTAGCGTGAACCTTGATGCTCACG