Detailed information on CNT30696975


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3068416Oryza sativaLeersia perrieri92.3615.5489.76254forward
CNT30352541Oryza sativaEragrostis tef25.093.0895.6569forward
CNT30104094Oryza sativaOryza rufipogon1006.4198.55275reverse complement

Expression of CNT30696975

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MTCLCVLPCVGSSIHLSAVADLQWQIKGFQKEILVMDVQCGCMGRSSWLARVALIHHARPLLF*

>peptide 2 (38 aa)
MEMERLLPLVAKNDLPMCFALCWLIHPSISRCRFAVAD*

Sequence

>CNT30696975
AGAATTGATAAGAGTAAAGAGTGAAAAAGAAGAGGGGAGCCTTACATGGAGATGGAGAGGCTACTCCCTTTGGTAGCCAAGAATGACTTGCCTATGTGTT
TTGCCTTGTGTTGGCTCATCCATCCATCTATCAGCCGTTGCAGATTTGCAGTGGCAGATTAAAGGGTTTCAGAAAGAAATTCTTGTGATGGATGTGCAAT
GTGGCTGCATGGGCCGGTCTTCTTGGCTAGCCAGAGTGGCTCTCATCCACCATGCCAGGCCACTCCTCTTCTGAA