Detailed information on CNT30104094


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696975Oryza rufipogonOryza sativa6.4110098.55275reverse complement

Expression of CNT30104094

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MFLTNINNKRGNLRGHDEHYYITKFHLQRECKIS*

>peptide 2 (45 aa)
MSSWPRLPKCLHYIEVVMVTLWCLLIYLRESLDSNSILHLFQLEI*

>peptide 3 (73 aa)
MTHMYASPTGSPTCQEKKKKHYMICELDRLCNVQAAGECMRHVRTPERGRVQLHIHVPQPQPPHAVANSSCPY*

>peptide 4 (61 aa)
MRATLASQEDRPMQPHCTSITRISFRNPLICHCKSATADRRMDEPTQGKTHRQVILGYQRE*

>peptide 5 (33 aa)
MTSIRKERFHHNDSLFIRQRVNFFLKTYMLSHF*

>peptide 6 (30 aa)
MWVPHKVLLYCYIFTCKQHLGKTTFVSSGT*

>peptide 7 (34 aa)
MRATLASQEDRPMQPHCTSYHKNFFQKPLICHGR*

>peptide 8 (51 aa)
MHAARTYARARPRAATHPRAAASTTTRRRQLVVSVLMVLLLQTACISSNIR*

Sequence

>CNT30104094
GGTTGATATAGCGGAACAATGACGAACCTTCTCGATTGTTTTAGTCATTGATCATTTAAGATATAAATGATGATATAGGAACACACATTATTCGTTAATG
AAATTCAGTAGAAGCCTACATCTCTGAGGCTCTAATTATGAGTGTTTCTCCTCAATCAACATAGCACCTAACCGCTATGAGTTCATGGCCTCGCCTCCCT
AAGTGTCTACACTATATTGAAGTTGTCATGGTTACATTGTGGTGTCTCCTTATCTATTTAAGAGAGAGCTTGGACTCTAACTCTATCCTACATCTATTCC
AACTCGAAATCTAATTATTCTTCCTGCTTTACAGAACCAGCGTCTGATGCATACTCTCTCCATCCTAAAAGATTTATTGTACTAGGATGGGTTACATCCA
TCCTAACTAGCTTGAGTTATTTTAAGACGTAGGAAGTACATCATTTTTTGCAAGCCCTGTCTAATTTGCATCTGGGATGGTGCTCTTTGCTCCAATTTGC
GAGAAGAAATGGTAATGGGGGAGAAGAAGAAGAGAGAGTTCTCAGATTCCAGTTGATACTCTGGTACTTGCATGTCATCCTTATTTTCTCAACTGAGAAC
GACTATGCTTGCTTTCGAATCATTACCATAATGATGATCATCCGAGTCCAAAATTGCACCAAATGAACAGAAATAATAATGTTCCTTACCAATATAAACA
ATAAGAGAGGAAATTTGAGAGGTCATGATGAACATTACTACATTACCAAATTTCATTTGCAGAGAGAATGCAAAATAAGCTGAAAAATTCTGAAGAGGGG
TGGCCTAGCATGGTGGATGAGAGCCACTCTGGCTAGCCAAGAAGACCGGCCCATGCAGCCACATTGCACATCCTATCACAAGAATTTCTTTCAAAAACCC
TTAATCTGCCATGGCAGATAGATAGATGGATGGATGAGCCAACACAGGGCAAAAGCATAGGCAAGTCATTCTTGGCTACCAAAGGGAGTAGCCTCTCAAT
CTCCATGTAAAGCCCCTCTTCTCTTCACTCTTCAGATATCTCTCTCTCTTATCTTGGATAAGCCAGAAAGGAAGTAGTGTCAAGTCTATTATATTAATTA
AGAGTGGTGTTCAAGTAACTGTAATTGTTATCATATGATCATATCACCTATCTAATAAACAATTGAACTTTTAACTCGGTCCAAAAGTACAAACTTGCAG
TTCTTTCTGATACAATCTTGCAGTTCGATTGATACAAACTTGCAGTTGATATAACACATATAGACAAACAGTGGCTCTAGCTCATATATGTGGTGCCAAA
ATTAGAGACCACTAAAAATATAGAATTGTATGGTAGCAAAAAACGCAGACCAAATTTACTCCTAATTTTAGCTTCTTACAGTGTATAACTAAGATGATGT
TACAGACATTGTATAATGACAGCTTCTAGGGCCACTTTGAAGCGTAGGATTGAGAAAATATATCAGTAGGAAAAATCATAATTTTGGTAGAAACACAAGT
ACAAAGCAGAGAATAGCAAAACACGGAAAAGTTATTGGAACGCTTTTAAGAAAAATATAAGATTTGGAGGAGAAATTAAGAAATAGTCTAGGGAAACTTT
TCACGAGGTTTGACCTCATGACAAATTACCTCCCAAACTTGATAGGTTGAGGCATTCCATAATTTTTTTTCAGATTCAATAGTAACCAATCATTTACTTA
AAAAATAGTGACCAATCTTTGTTCTAAATAACTATTTAGAAAAAAATCCTATAAAATTTAAATTCTACAAAAATAATTTATCCTTTATTCAAAGGGAGTC
TTACAAATAATTTGTTCCAAACCAAGTAATCCGTAATGTAAGAAGAAAGCATTGGCATCAGATACAACAACACAACAGGGGAAGGGGGGAAGAGGGAGAG
AGCGGAGGAAGAACAGAAGAGAGGGACAATATGTGGGTCCCACATAAAGTTTTACTTTATTGCTATATTTTCACATGTAAGCAGCATTTAGGAAAAACAA
CTTTTGTAAGTTCAGGCACCTGATTTATCTTTAAAAAATAGGCATCGTTCCACTAGTAAAAATTATTTCGTCACTCGGTCAAATGTTACAACTCACTTGG
TGAAATGTTTCAAAGAGATAAAACATTTAAAAAATATTGATTGCAACATTGATAACCACCATATTAACATTCAATCCCAACAACGAGAAAAAAAAACAAG
TGCAATGGAGTCGAATTCCAATTGAAACATTCGCTTCTTACACATGAAACATCAAATTTCAATTGTAGAAGCATATATATTTCTTATTGGAATATAGTTA
TGTAATATTTTGTTAAAAATATTTAATTATAACAGATACAATTATGTAATAGGATAAGTATTTTAAAAGAAAAAATCATTTAAGGGTTGTTAATAGAGTC
TTCTCCATGTTACACGCAACATATAGTCTCATCATACTACGAAAAGAAAGAGAAAAATGATCATCACAACTACCGAGAGGGAAAGATAGAGCCAGCAAAG
TACATGTGCATATCGGAAAAAAAAAGTAAGTAGCAGGTAGAAGTATGGTGTCTTGATATTTGGTTATCGATCGGGTGTGTGGTGCAAAACTTTCTCCTAA
TGCTAAAGTAGATAGTCTAAAATTAAGGGATAAATATAGACGCTCATATACACCAGCGTACAATTATCCCTATAAACGTATACACGAATACCCTACATTT
ACGAACACCTCTAAGACTGAGCAGATATATCTCGAGACTGATGAAGCCACTACAAGAGAACTGCTCGTTATCTATGAGTACATTGTTCACTGCTTAAAAA
ATTAAATAATCATCACTAAGAGCACATATGACTTCAATTCGAAAGGAAAGGTTTCACCACAACGATTCTTTATTCATTCGTCAAAGAGTAAACTTTTTCC
TAAAAACATATATGCTCTCTCATTTCTAAAATATAAGCATTTTTAACATAGTGTTAAGTCAAACATTTTTAACTTTAACTATTAATAAAAAAATTAAAAA
TATCAATAATATAAAATTAATGTTATTAGATTTATCATTAAACAAACTATCATAATATGCAACTATTTTTATTTAAAATATTTTACTTTAATTAATATTA
TTTTACTTTTATAGATATCGTTGATCAAAATAGCATCTCGAAGACTGGGTCGACGAAGGGAGTATATATCATATCATCATCATCTTATTCGCAAAATTAT
ATAATATACTCCTGTATCTATCCCATCAGACATATATACATCGTTCAGACTCCAATCTCGACCGCAGTCTAATTAATTAATTAATTAACCATCACGTAAA
CGTTAATCACTTCCTTTAAAGATGACACATATGTATGCCAGCCCGACCGGCAGCCCCACTTGTCAGGAGAAAAAAAAGAAGCATTACATGATCTGCGAGC
TAGATCGGCTGTGCAACGTGCAAGCGGCCGGCGAATGCATGCGGCACGTACGTACGCCAGAGCGCGGCCGCGTGCAGCTACACATCCACGTGCCGCAGCC
TCAACCACCACACGCCGTCGCCAACTCGTCGTGTCCGTACTAATGGTTCTTCTCCTACAGACAGCATGCATCAGCAGTAACATACGGTAAAATGGGATTA
ATTGGACGATTTCATCTGCTCTTTACAGAATCAGCCTTAGCTATAGATTAACGGCATTGATTCTTTGGTCCAATTGCGTACAGAAAATCGTAATGGGAGG
AAAAGGGAAGAGCAAGTTCAGAGATTTCAGTTGATAGTAGTTTGCTCCTGCATATGCTCTTTACCCTGATCTCTGAAATGACAACAATTCCTGGCTTTCG
AATTAGTGCAGCAGAATGATCTGAATCAAGATTTGCACCAACCAAACGGTAACATCCTATACCAACATAGACAAGAATTGAACAGAGAGGAAAAGTAAGA
TCGTGAGAGATCAGGATGAACATTACCAAATTCCCTTTGTATTGAGAGAGAGAAAGAGAGCAAAAGGGCTGAAAATTCAGAAGAGGAGTGGCCTGGCATG
GTGGATGAGAGCCACTCTGGCTAGCCAAGAAGACCGGCCCATGCAGCCACATTGCACATCCATCACAAGAATTTCTTTCAGAAACCCTTTAATCTGTCAC
TGCAAATCTGCAACGGCTGATAGACGGATGGATGAGCCAACACAAGGCAAAACGCATAGGCAAGTCATTCTTGGCTACCAAAGGGAGTAGCCTCTCCATC
TCCATGTAAGGCTCCCCTCTTCTTTTTCACTCTTTACTCTTATCAATTCTTCAGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGTGTGT