Detailed information on CNT30696063


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30390391Oryza sativaTriticum turgidum6.6445.6284125reverse complement
CNT30258582Oryza sativaAvena sativa4.5234.6984.7185reverse complement
CNT30340519Oryza sativaEragrostis tef8.9344.3380.95168forward
CNT30110517Oryza sativaOryza longistaminata8.2920.4790.38156reverse complement
CNT30103234Oryza sativaOryza rufipogon5.5826.3288.57105reverse complement

Expression of CNT30696063

Peptides detected in this lncRNA

>peptide 1 (33 aa)
ANDLYASIFLWIRASVQVAFKNCVAGIHGSRIQ*

>peptide 2 (40 aa)
MILYNSTGLQYNAKLSSAASCSSGESRALGWWRHIWYLRTG

>peptide 3 (63 aa)
MKELAFLKDYFLGSARSTDSFLVFPNCNTVGAERLLPCPLIDREKPGPLLFHHSYVMCGSMKP*

>peptide 4 (53 aa)
MEIPEVYQPKTHNGKGHAMRLVPNTINCRIELSTHDCYLIICVNDEGGTSLYE*

>peptide 5 (52 aa)
MKQEDRLVFYPRNTSLQALSKCITWFIQMVAKSAPCTTADKDNIKAASSGGC*

>peptide 6 (29 aa)
MTKVAHHYMNKHYKETRTCLLHQPLEQIC*

>peptide 7 (29 aa)
MRRSNKILQWRFQKFTNPKLIMEKVMRCV*

>peptide 8 (29 aa)
MRSFLQLQAAHRERAEPLAGGGTSGICGPG

>peptide 9 (31 aa)
MARASSRLWFQSLTIKNLQHLRAGFCTSSCP*

>peptide 10 (33 aa)
MHNKFLVFCNINKIIKHLHLLREVKVSRIWTHL*

Sequence

>CNT30696063
TGGCCAATGATTTGTATGCGTCAATTTTTCTTTGGATCCGAGCTTCCGTTCAGGTAGCCTTCAAGAATTGTGTTGCAGGCATTCATGGCTCGCGCATCCA
GTAGACTGTGGTTCCAGAGTTTGACCATAAAAAACCTCCAACACCTTAGAGCTGGATTTTGTACAAGTTCTTGTCCATGAAACTGCGAGAATGCTTCGCA
TGCCCAGGGAATATGGCCATCCGCTAGCCTGACCTTTGTTTCCGAACAAATGAATTCCACATATGCATAATAAGTTTCTCGTCTTTTGTAACATCAACAA
AATCATCAAGCATCTGCATTTACTCAGGGAAGTTAAGGTATCAAGAATTTGGACACATTTATAGAGATGAAAGGTATCGATTCACTCACTTGAGCCCTGT
GAGAATGAAAGAACTGGCGTTTTTAAAGGATTACTTTCTGGGATCAGCTCGTTCAACAGACAGCTTTCTTGTCTTCCCAAACTGTAACACTGTTGGTGCT
GAAAGATTGCTACCATGTCCACTTATAGACAGGGAAAAACCGGGGCCTTTACTATTTCACCATTCATATGTAATGTGTGGCAGTATGAAACCATAAAGTG
AGAAAGTACCATTTTCCCTCTGCACGTAATCGTCTTCAGATCCTGCCTGGGCATCTTCAGGTGATCCTGAATCCACAATATGTGGATGTACATGCCTAAT
TTTATCACTTGAGATTTCCACCCTTTTACGCTTCTTAAATCTTGAGCTGATGGAAAACAACAATTAAAATGGAATGTTTTGATGTTTCATACCACTAATT
TACCTCTGTTCTCCAAGAATCAGTCTTCAGACTAACATTAACAGCCTGGCACTCTTCAGATATCTGTGCAAACATAAAAAGAAAGGTTAAATGACCTATG
CGAAGGAGCAATAAGATCTTGCAATGGAGATTCCAGAAGTTTACCAACCCAAAACTCATAATGGAAAAGGTCATGCGATGCGTTTAGTCCCAAACACAAT
AAACTGCAGGATTGAACTATCAACTCATGATTGCTACCTTATAATATGTGTCAATGACGAAGGTGGCACATCATTATATGAATAAACACTATAAGGAGAC
TCGGACATGTCTTTTGCACCAGCCTCTTGAGCAGATATGCTAACTTGCAGTTGAAATGAACCCTGCAATAGTAAAACTCAACAATATCAGAAAAGCGGTG
GTGAAAAGTCGGCCATACCTCTAAGAAGCTTGGGGTCATCTCAACCGTGGAAGACATTTCCACGGTATGTCCCAAACTTAAGCTCACACAATTTCCCAAA
GATGAAGCAAGAAGATCGATTGGTATTTTACCCCAGAAACACTTCCCTTCAAGCTCTGTCAAAATGCATCACATGGTTCATACAAATGGTTGCAAAGAGT
GCACCCTGTACCACAGCTGATAAGGATAATATTAAGGCTGCAAGCTCGGGAGGTTGCTAAGTTCTTCACATCAGGAATGACGAATGTTGCTTCAGTGTAG
TCTTTATTTCCAAATTCATGAAAAGAAGTCAACAAACAAGCACGACTGAATCGATATATCGGAGAATGCTGCACATCATGATCATTTGTAGGTCTAGCTA
ACAGAACATAAAGAGGAAAGATATTTTGTGCCCGCAGTTCTTTATTTGTGCCTCCAGAAAGTGATATGTCAAAGCATACCTCTTCTTCCGTCTTGCGTGA
ATCTTGTAAAGAAGGCATCTTTGAAGAAAAGCAGGCTTTTTAATGGATCGGCGCTGAATGATATTATACAACTCGACCGGCTTGCAGTATAATGCGAAGC
TTTCTTCAGCTGCAAGCTGCTCATCGGGAGAGAGCCGAGCCCTTGGCTGGTGGCGGCACATCTGGTATCTGCGGACCGGGGG