Detailed information on CNT30340519


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696063Eragrostis tefOryza sativa44.338.9380.95168forward

Expression of CNT30340519

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MGGRQVLHIGNDECGFSVAIISKFTRWCKQTNPTESIYWRMLQIHIINEHLADDIKAYH*

>peptide 2 (66 aa)
HSYRICAVPQLIRIMVRLQEWEVDKFFTSGMMNVASVLPLFPNSLDGVSKQIRLNLYIGECCKFTS*

Sequence

>CNT30340519
ACACTCGTATAGGATATGCGCTGTACCACAACTAATTAGGATAATGGTAAGATTGCAAGAATGGGAGGTCGACAAGTTCTTCACATCGGGAATGATGAAT
GTGGCTTCAGTGTTGCCATTATTTCCAAATTCACTAGATGGTGTAAGCAAACAAATCCGACTGAATCTATATATTGGAGAATGCTGCAAATTCACATCAT
AAATGAGCACTTGGCAGATGACATAAAAGCTTATCATTAAGTTTAAAAAAATAAAGAAACCTAAACGTACCCCGTCAAGTGAAACATTACTAGTAGGTCT
TGCTAACAAAACATAGAGAGGAAAAATATTCAGTTCTTTCAATTCGGTATTTGTGCTTCCAGAAAGTGATACAGTTATC