Detailed information on CNT30103234


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696063Oryza rufipogonOryza sativa26.325.5888.57105reverse complement

Expression of CNT30103234

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MENSEDHTVKSTSLYDLYLRTYTYLVDFTV*

>peptide 2 (36 aa)
MIFTCVHIPIWSTSLYDLYLRTYTYLHMLLYSLKSQ*

>peptide 3 (39 aa)
MGRQESCLLNELIPEIASSYKNASSFILTGLKWVNQSSG*

>peptide 4 (29 aa)
MIFTCVHIPIFTCYYIPLNRNKIIPSITK*

Sequence

>CNT30103234
TATGGGAAGACAGGAAAGCTGTCTGTTGAACGAGCTGATCCCAGAAATCGCTAGCTCCTACAAAAACGCAAGTTCTTTCATTCTCACAGGACTCAAGTGG
GTGAATCAATCAAGTGGGTGAATCAATACCGTTCATCCCTCTTCATCTATCTTCTGTCTGCATATATTTGTAGCAAGAATCAGTGGTTGATGGAAAACAG
TGAAGATCATACAGTGAAGTCGACTTCACTGTATGATCTTTACTTGCGTACATATACCTATTTGGTCGACTTCACTGTATGATCTTTACTTGCGTACATA
TACCTATCTTCACATGCTACTATATTCCCTTAAATCGCAATAAGATAATCCCCTCAATAACCAAATAGAGCATCGACACCTCACAATAAAAATCATTCA