Detailed information on CNT30691369


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554191Oryza sativaOryza glaberrima58.5515.7987.64267reverse complement
CNT30596483Oryza sativaOryza meridionalis46.4928.886.32212reverse complement
CNT30109567Oryza sativaOryza longistaminata50.8858.5993.53232reverse complement

Expression of CNT30691369

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MDMGMDPFESRLDKLSMKYLHAQIGVRMKSCRPSDVGAILQSESTPRESSPRLDPPHRS*

Sequence

>CNT30691369
GTGGAGTTCAGCAACAAGAAATCCGGGGATCTAACTGGTCATGGGATTAACTCGGCCAAGTAGCGACGCTATACTTTGATCTAAACAAAGCCCAAGTGTT
CTTGGCGGCGGCTAAAGGTATAAGAAGAGGGGGAGAACGACCACAGGGGTGTTGGTGTCGTGCTCTAACCCTAGGACGCACCCCTAATGGGTGACGCAAC
ATCGTGGACAGAAAAGTACTCGACAGTAAAATGATGATTGCAGCTGCTCCAGATCAGATATGGACATGGGAATGGATCCATTTGAAAGTAGACTTGATAA
GCTTTCCATGAAGTACTTGCACGCCCAAATCGGAGTTCGCATGAAGTCGTGCCGGCCGTCAGATGTTGGCGCTATCCTGCAGTCCGAATCCACCCCGCGC
GAATCCTCTCCCCGTTTGGATCCTCCCCATCGTTCCTGAGTAAAACAAGAGTGCAC