Detailed information on CNT30689346


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30177602Triticum urartuSecale cereale24.3254.8193.58296forward
CNT30300315Triticum urartuTriticum aestivum47.331789.06576forward
CNT30441022Triticum urartuAegilops tauschii17.0140.3594.2207forward
CNT30661765Triticum urartuTriticum dicoccoides7.2321.3697.7388forward

Expression of CNT30689346

Peptides detected in this lncRNA

>peptide 1 (45 aa)
AFMSVQDPLVPKDWTGEALPASDEEKGALGFSVLQRAHCRTSRWR*

>peptide 2 (49 aa)
MFVIFTGILLVEIMLMVYFYVLQHMLFFGLYGILIWCFGSWDIRLHFFM*

>peptide 3 (54 aa)
MTLLWLISTQWHVCNIYRDFTCRNNAHGIFLCPAAHALFRSVRNLDMVFWQLGY*

>peptide 4 (58 aa)
MLNNMLLICCYILKCLPFTLFLHLLYSQIVVVSGLDKQTSTVVVSGLDKQTRYDLCSC*

>peptide 5 (30 aa)
MITGYLILVGMVGSFGTPLFGSHQLTFVAG*

>peptide 6 (31 aa)
MPLLPVEWSIHDCSVTCLFRNNLLGPSYLTM*

>peptide 7 (73 aa)
CVHVCAGSARAQGLDRGGAPGLGRRERCPGFLGFAESTLSNQQMAMTQMRSLGERQHGESSTGIVGHPLRGCV*

>peptide 8 (58 aa)
VRSCLCRIRSCPRTGQGRRSRPRTKRKVPWVSRFCREHIVEPADGDDTDEELRREATW*

Sequence

>CNT30689346
GTGCGTTCATGTCTGTGCAGGATCCGCTCGTGCCCAAGGACTGGACAGGGGAGGCGCTCCCGGCCTCGGACGAAGAGAAAGGTGCCCTGGGTTTCTCGGT
TTTGCAGAGAGCACATTGTCGAACCAGCAGATGGCGATGACACAGATGAGGAGCTTAGGCGAGAGGCAACATGGTGAATCTAGTACAGGCATCGTTGGCC
ATCCTCTTCGAGGCTGTGTTTAGGTGATTCCTCGGGTAGCCATGACACTACTCTGGCTGATTAGTACCCAGTGGCATGTTTGTAATATTTACAGGGATTT
TACTTGTAGAAATAATGCTCATGGTATATTTTTATGTCCTGCAGCACATGCTCTTTTTCGGTCTGTACGGAATCTTGATATGGTGTTTTGGCAGCTGGGA
TATTAGATTGCACTTCTTTATGTGATTTACTCATGTTGGTACTGCTTGTTAAGTGATTATCTTTATGCCCTTGCTACCAGTAGAATGGTCTATACATGAT
TGCTCTGTAACTTGTCTTTTCCGGAACAATTTGCTTGGTCCTTCATATCTGACTATGTAATGTAGAAGCTCTACTTTATCCTAACAGTTGCATGTAGCAT
TGTGCTACTATCTGTGTGATGCTAAACAATATGCTCTTAATCTGTTGCTATATTCTCAAGTGTTTACCATTTACATTGTTTTTACATTTGCTATATTCAC
AAATAGTAGTAGTGTCTGGTCTAGATAAGCAAACAAGTACTGTAGTAGTGTCTGGTCTGGATAAGCAAACAAGGTATGATCTATGCAGTTGTTGATCTGA
ATTGTTTGTTTCTGGGCGGTGTAGGATGAGCTGCAGCAGGATGACCTGTAGCGGAAGAACTTCGAGGGCAAGATCAAGGAGAACCAGGAGATGATCACCG
GTTACCTCATCCTCGTCGGCATGGTTGGCTCCTTTGGCACACCCCTCTTTGGCTCCCACCAACTTACTTTTGTCGCTGGCTAGCAGCATTTCCAGGTGTT
GCGTGTTCTGGAAGATGGAAGAGGAAGAAAATTTATTTTTGTTGAACTATTTTTTTGTATTATGTTTTGTTGTACATATGATTTGATAGTTTTGTATAGG
AACATGTGATACTATTTTGTAGGGCTTTACAGCCTGTGATGTAAACATATTTAGTGATGAATTATGAAATTATTTGCAAAATTTATTGAAAAGGAGAATC
ATTTGTATGAATATGGG