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Detailed information on CNT30661765


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30182501Triticum dicoccoidesSecale cereale20.8711.0395.3586reverse complement
CNT30396961Triticum dicoccoidesTriticum turgidum27.9111.2397.39115forward
CNT30434950Triticum dicoccoidesAegilops tauschii21.1218.5195.487forward
CNT30689346Triticum dicoccoidesTriticum urartu20.877.0797.6786forward

Expression of CNT30661765

Peptides detected in this lncRNA

>peptide 1 (31 aa)
QVKCPAMLLTDQSHWQVERAGRDDPRYHSVR*

>peptide 2 (54 aa)
MEPDVAAEEQSDQAPPKGHLEGLTHQVLCVLEDGRGRKLIFVELNFLYSVLLYV*

Sequence

>CNT30661765
ACAGGTGAAGTGTCCAGCTATGCTTCTCACTGACCAGTCACACTGGCAAGTCGAACGCGCAGGGAGAGACGACCCTCGTTACCACTCTGTACGCTGATCT
TGATTCACGACTGGGGTGTGCAGTACGTCCGCAGGTGCCACGGATATGGAGCCTGATGTTGCTGCTGAAGAGCAGAGCGATCAAGCTCCCCCAAAGGGAC
ATCTAGAGGGCCTTACTCATCAGGTGTTGTGTGTTCTGGAAGATGGAAGAGGAAGAAAACTAATTTTTGTTGAACTAAATTTTTTGTATTCTGTTTTGTT
GTATGTATGATTTGATAGTTTTGTATAGGAACATGTGATACTATTTTGTAGGGCTTTATGGCCTGTGATGTAAACATATTTAGTGATGAATTATGAAATT
ATTTGCAAAATT